| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1680 |
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| Symbol | |
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| ID | 4032933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1877623 |
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| End bp | 1879242 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970153 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_576957 |
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| Protein GI | 92117228 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0890826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACC TCGCATTGCA GACTGTATCG CCCTCGCGCT CGCCATTGGC GGCGGAAGTC
GCGCGCCGGC GCACCTTCGC GATCATCTCG CATCCCGACG CCGGCAAGAC CACGCTGACG
GAAAAGCTGC TGCTGTTCGG CGGCGCCATC AATCTCGCCG GGCAGGTCAA GGCCAAGGGC
GAGCGGCGCA ACACCCGGTC AGACTGGATG AAGATCGAGC GCGAGCGCGG CATCTCGGTG
GTCACCTCGG TGATGACCTT CGAGTTCGAG AATCGGGTCT TCAATCTGCT GGACACACCG
GGCCACGAGG ACTTTTCCGA GGACACCTAC CGGACGCTGA CCGCCGTGGA TTCCGCGGTC
ATGGTGATCG ACGCGGCCAA GGGCATCGAG GCGCGCACCC GAAAGCTGTT CGAGGTCTGC
CGTCTCCGCG ACATTCCCAT CATCACCTTC ATCAACAAGA TGGACCGGGA GAGCCGCGAC
ACCTTTGATC TGCTCGACGA GATCGAGAAG ACGCTGGCGC TCGATACCAC CCCGATGACC
TGGCCGGTCG GGCGCGGCCG CGATTTTCTC GGCACTTACG ACATCGCGAC CGGCGGCATC
CGCCTGCTCG AGGGCGGCAG CGCCAAGACC GGCGCGGCCG AACAGATCGA CATCGCCGAT
CTCGCCGCGC GCAATGCCAA TCTGAATGTC GACGAGATCA GGGAGGAACT GGCGCTGGCG
ACCGAAGCCT GCAAGCCGTT CGAGCTTGAC GCGTTTCGCG AGGGGCATCT GACGCCGGTG
TATTTCGGCT CGGCGCTGCG CAATTTCGGT GTCGGCGATT TGCTGGATGG GCTCGGAAAA
TTCGCGCCGC CGCCGCGCGC GCAGGAGTCG AACCTGCGCA AGGTCGAGGC CGATGAGCCG
CGCATGACCG CGTTCGTGTT CAAGATCCAG GCCAACATGG ATCCGAATCA TCGCGATCGC
ATCGCTTTCG CCCGCCTCTG TTCCGGCAAG CTGACGCGCG GCATGAAGGC GAAGCTGGTG
CGCACCGGCA AGCCGATGCC GCTGTCGTCG CCGCAATTTT TCTTTGCTCA GGATCGCGCG
ATTGCGGACG AGGCGTTCGC CGGCGACGTG GTCGGTATTC CCAATCACGG CACATTGCGG
ATCGGCGATA CCCTGACCGA AGGCGAGGAT GTCACCTTCG TCGGCGTGCC GTCGTTTGCG
CCGGAGATCG TGCGCCGCGT GCGGCTGACG GATGCGATGA AGGCGAAGAA GCTGAAGGAG
GCCCTGCAGC AGATGTCGGA GGAGGGCGTC GTGCAGGTTT TCCGTCCGCG CGACGGTGCG
CCCGCGCTGG TCGGCGTCGT CGGTATGCTG CAACTCGATG TGCTGAAAGC ACGTCTCGCT
GCCGAGTATT CGCTGCCGGT GGATTTCGAG ACCAGCGAAT TCCAGCTCGC GCGCTGGATT
TCTTCCGACG ATCACAAGAG GCTCGATACC TTCATCGCCG CCAACGGCTC CGGTGTCGCC
GACGACGTCG ATGGCGACCC GGTGTTCCTG GCCAAGAACG AATTCTATCT CGGTTACACG
AAGGAACGGG CCGAAGGCAT CACGTTCTCC AGCGTCAAGG ACGTGAAGAA AACATCATAA
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| Protein sequence | MSDLALQTVS PSRSPLAAEV ARRRTFAIIS HPDAGKTTLT EKLLLFGGAI NLAGQVKAKG
ERRNTRSDWM KIERERGISV VTSVMTFEFE NRVFNLLDTP GHEDFSEDTY RTLTAVDSAV
MVIDAAKGIE ARTRKLFEVC RLRDIPIITF INKMDRESRD TFDLLDEIEK TLALDTTPMT
WPVGRGRDFL GTYDIATGGI RLLEGGSAKT GAAEQIDIAD LAARNANLNV DEIREELALA
TEACKPFELD AFREGHLTPV YFGSALRNFG VGDLLDGLGK FAPPPRAQES NLRKVEADEP
RMTAFVFKIQ ANMDPNHRDR IAFARLCSGK LTRGMKAKLV RTGKPMPLSS PQFFFAQDRA
IADEAFAGDV VGIPNHGTLR IGDTLTEGED VTFVGVPSFA PEIVRRVRLT DAMKAKKLKE
ALQQMSEEGV VQVFRPRDGA PALVGVVGML QLDVLKARLA AEYSLPVDFE TSEFQLARWI
SSDDHKRLDT FIAANGSGVA DDVDGDPVFL AKNEFYLGYT KERAEGITFS SVKDVKKTS
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