Gene Nham_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1677 
Symbol 
ID4032930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1875417 
End bp1876073 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID637970150 
Producthypothetical protein 
Protein accessionYP_576954 
Protein GI92117225 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.324564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGCTG CGATGCTGCG TTGGTTCCGG TCCTTTCTGC CGAAAGAGGA ACGCTTTTTC 
GACCTGTTCG CCCGCCATTC GCAGACGATC GTGCAGGGGG CGCAGGCGCT TCAGGAGGTG
CTGAAAGGCG GTGAACAAAC ACCGGTGTTC TGCCAGCGGG TCAGCCAGCT CGAGAACGAT
GCGGACGGCA TCACGCGCGA AGTGCTGACC GCGGTCCGCC GCACCTTCAT CACTCCGTTC
GACCGCGTCG ACATCAAGAA CCTCATCACC TCGATGGACG ACGCCATCGA CCAGATGCAG
CAGACCGCGA AGGCCGTGGT GCTGTTCGAG GTGCGCACCT TCGAGCCGCC AATGCGCGAG
ATGGGCACGC TGATCGTGGA ATGCGCCAAT CTGGTCGGCC GCGCGCTGCC GCTGCTTCAG
TCGATCAGCA ACAACGTCGC GATGCTGACG GCGATCACCG AGGAGCTCGG CAAGCTGGAA
GGCCGTGTCG ACGATCTGCA CGATATCGGC CTGAAGGAGC TTTTCCTGAA ACACCGTAGC
GCCAACGCGA TGGACTTCAT TGTCGGCGTC GAGATCTACG ATCACCTGGA GAAGGTCGCC
GACCGCTTCG ACGACGTTGC CAACGAGATC AGCAGCATCG TCATCGAGCA GGTATAG
 
Protein sequence
MDAAMLRWFR SFLPKEERFF DLFARHSQTI VQGAQALQEV LKGGEQTPVF CQRVSQLEND 
ADGITREVLT AVRRTFITPF DRVDIKNLIT SMDDAIDQMQ QTAKAVVLFE VRTFEPPMRE
MGTLIVECAN LVGRALPLLQ SISNNVAMLT AITEELGKLE GRVDDLHDIG LKELFLKHRS
ANAMDFIVGV EIYDHLEKVA DRFDDVANEI SSIVIEQV