Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1674 |
Symbol | |
ID | 4032927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1872111 |
End bp | 1873340 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637970147 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_576951 |
Protein GI | 92117222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACCA GATTAGCGGC TCTACTCGTT GGCACGGCGC TGACCTTGGG CATGACCGTC GGCGCGACGG CCCAGGACAA ACAGGACAAG AACGTCAAGA TCGGCGTGCT GACCGATCTT TCCGGCCTTT ATGCAGACCT CGCCGGGGAG GGGTCGGTCG TCGCGGCGCA GATGGCGGTC GATGATTCCG GGCTGAAGGC CAAGGGCTGG ACAATCGACG TGATCTCGGC GGATCACCAG AACAAGCCCG ACATCGGTAC CGGCATCGCG CGCCGATGGA TCGATACCGA CAAGGTCGAC ATTATCGCCG ATGTCCCGAA CTCCGGCGTT GCGCTCGCCG TCAACAACAT CGTCAAAGAG AAGAACCGCA TCCTGCTCGA TTCCGGCGCC GGCTCTTCGG AGTTGACCGA CACGCAGTGC ACGCCGAATA CGGTCCATTT CACCTACGAC ACCTACATGC TGGCTCACAG CACCGGCAGC GCCATGGTGA AGGCCGGCGG CGATAGCTGG TTCTTCATCA CGGCGGACTA CGCCTTCGGT CATGCCCTCG AGAACGATAC GGCTGCGGTC GTCAAGGCCG CCGGCGGCAA GGTGCTGGGA AGCGTCAGGG TGCCGCTAAA CACGGCCGAC TTCTCGTCAT ACCTGCTGCA GGCCCAGGCA TCGAAGGCCA AGGTGATCGG GCTCGCCAAT GCCGGCGGGG ATACGACGAA CTCGATCAAG CAGGCGGCGG AATTCGGCAT CGTCAAGGGC GGCCAGAAAC TAGCCGGCCT GCTGATGTTT CTGTCGGATG TTCACTCGCT CGGCCTGAAC GTGGCGCAGG GCCTCAACCT GAGCGAGACG TTCTACTGGA ACATGAACGA CCAGACCCGG GCCTTCTCGA AGCGCTTCAG CGAACGTCTG AAAACCCATG CGATGCCGAC GATGGTTCAT GCCGGCGTCT ATGCGGGCCT GCTGCACTAC CTCAAGGCGC TGGAGGCCCT CGGCGGCAAT CCGCATGACG GCGCCAAGGT GGTGGCCAAG ATGAAGGAGA TACCAACCGA CGATCCGCTG TTCGGCAAGG GTACGATCCG GATCGACGGT CGCGCGATTC ATCCGGCCTA CCTGTTCGAA GTCAAGACGC CTGCGGAATC GAAGGGCGAG TGGGATCTCT ACAAGCTGGT CGGCACCACG CCCGGAGATG ATGCGTTCCG GCCGTTGTCG GAAAGCAAGT GCCCGCTGGT CAAGCATTGA
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Protein sequence | MRTRLAALLV GTALTLGMTV GATAQDKQDK NVKIGVLTDL SGLYADLAGE GSVVAAQMAV DDSGLKAKGW TIDVISADHQ NKPDIGTGIA RRWIDTDKVD IIADVPNSGV ALAVNNIVKE KNRILLDSGA GSSELTDTQC TPNTVHFTYD TYMLAHSTGS AMVKAGGDSW FFITADYAFG HALENDTAAV VKAAGGKVLG SVRVPLNTAD FSSYLLQAQA SKAKVIGLAN AGGDTTNSIK QAAEFGIVKG GQKLAGLLMF LSDVHSLGLN VAQGLNLSET FYWNMNDQTR AFSKRFSERL KTHAMPTMVH AGVYAGLLHY LKALEALGGN PHDGAKVVAK MKEIPTDDPL FGKGTIRIDG RAIHPAYLFE VKTPAESKGE WDLYKLVGTT PGDDAFRPLS ESKCPLVKH
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