Gene Nham_1669 details

Gene Information

• Locus tag: Nham_1669
• Symbol: thrS
• ID: 4032922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 1866967
• End bp: 1869012
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637970142
• Product: threonyl-tRNA synthetase
• Protein accession: YP_576946
• Protein GI: 92117217
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.115883
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACA AGCGCGAAAC CGCACCGGGA TTCCAGTTTG GCCTCGCCAA CCTGAAGCCC 
GTCTCGACCA CCGAAAACGT CACCCTCGCC TTCCCCGACG GCGCGCAGCG TCAGTTCCCG 
AAAAACACCA CCGGCCTCGA TATCGCCAAG GGCATCTCGC CGTCGCTGGC GAAGCGCACG 
GTGGCGATGG CGCTCGATGG CGTGGTCAGC GATCTTGCCG ACCCGATCGA ACGCGACGCA 
AAAATCGAAT TCATCAACCG CGACGACCCG CGCGCGCTGG AACTGATCCG GCACGACGCA 
GCGCATGTGC TGGCCGAAGC CGTGCAGTCG CTGTGGCCGG GCACGCAGGT CACCATCGGC 
CCGGTGATCG AAAACGGTTT CTATTACGAC TTCTTCCGCA ACGAGCCGTT CTCGCTGGAA 
GACTTCCCCG CGATCGAGAA GAAGATGCGC GAGATCATCG CGCGCGACAA ACCCTTCACC 
AAAGATGTCT GGGACCGCGA AAAGACCAAG CAGGTGTTCC GCGACAAGGG CGAGGCCTTC 
AAGGTCGAAC TGGTGGACGC CATTCCCGGC GACGAGCCGA TCAAGATCTA CTATCAGGGC 
GACTGGTTCG ATCTCTGCCG CGGCCCGCAC ATGACCTCCA CCGGCAAGAT CGGCAACGCC 
TTCAAGCTGA TGAAGGTGGC CGGCGCTTAC TGGCGCGGCG ACAGCAACAA TCCGATGCTG 
ACCCGCATCT ATGGCACGGC GTTTGCGAGC CAGCAGGATC TCGACGCTTA CCTCAAACAG 
ATCGAGGAAG CCGAGAAGCG CGACCATCGT CGTCTGGGCC GCGAGATGGA CCTGTTCCAC 
TTCCAGGAGG AAGGCCCCGG AGTCGTGTTC TGGCACGCCA AGGGCTGGAC ACTGTTTCAG 
GAAATCATCG CCTATATGCG CCGGCGACTT GCTGAGGATT ATGACGAGGT CAACGCCCCG 
CAGATGCTCG ATAAGTCGCT GTGGGAGACC TCCGGCCACT GGGAGTGGTA TCGCGAGAAC 
ATGTTCGCCG CGCAGTCGGC GGGCGACGAA GCCGAGGACA AGCGCTGGTT CGCGATCAAG 
CCGATGAACT GCCCCGGCCA TGTTCTGATT TTCAAACACG GCCTCAAGAG CTATCGCGAA 
TTGCCGATCC GCCTCGCCGA GTTCGGCGTC GTGCATCGCT ACGAGCCCTC GGGCGCGATG 
CACGGCCTGA TGCGCGTGCG CGGTTTCACC CAGGACGATG CGCACATTTT CTGCACCGAG 
CAGCAACTCG CCGACGAATG CCTCAAGATC AACGATCTGA TCCTCTCGAC CTATGAGGAT 
TTCGGCTTTG AAGGCGAGCT TACGGTCAAG CTCTCGACCC GCCCCGACAA GCGCGTCGGC 
TCGGATGCGG CGTGGGATCA TGCCGAAAGC GTGATGACGG CCGTGCTTGA GCAGATCAAG 
GCCAGGTCCG GCAACCGCGT CAAGACCTCG ATCAATCCCG GCGAGGGCGC GTTCTACGGT 
CCGAAGTTCG AATACGTGTT GCGGGACGCC ATCGGCCGCG AATGGCAGTG CGGCACCACG 
CAGGTCGACT TCAACCTGCC GGAGCGGTTC GGCGCGTTCT ACATCGACGA ACATTCCAAC 
AAGGTCGCGC CGGTGATGGT CCACCGCGCG ATCTGCGGCT CGCTGGAGCG TTTCGCCGGC 
ATTCTGATCG AGCACTTTGC CGGGCATTTT CCGCTCTGGC TCGCGCCCGT GCAGGCCGTC 
GTTGCCACCA TCACCTCCGA CGCCGACGAC TATGCCAGGG AGGTCGTCGC CGCCGCGCGC 
CGCGCGGGCC TTCGCATCGA GATCGACCTG CGCAACGAGA AGATCAACTA CAAAGTGCGC 
GAACACTCGC TGGCGAAGGT CCCAGCTTTG CTTGTGGTTG GCAAGAAGGA AGCCGAAAGC 
CGTTCGGTGT CGATCCGCCG CCTCGGCAGC GACGGCCAGA CAGTGTTGCC GACCGATGAG 
GCGATCGCAG CGCTGGTCGA GGAAGCCACG CCGCCGGACA TAAAGCGGGA AAATAATCCG 
AAGTAA 

 

Protein sequence

MSDKRETAPG FQFGLANLKP VSTTENVTLA FPDGAQRQFP KNTTGLDIAK GISPSLAKRT 
VAMALDGVVS DLADPIERDA KIEFINRDDP RALELIRHDA AHVLAEAVQS LWPGTQVTIG 
PVIENGFYYD FFRNEPFSLE DFPAIEKKMR EIIARDKPFT KDVWDREKTK QVFRDKGEAF 
KVELVDAIPG DEPIKIYYQG DWFDLCRGPH MTSTGKIGNA FKLMKVAGAY WRGDSNNPML 
TRIYGTAFAS QQDLDAYLKQ IEEAEKRDHR RLGREMDLFH FQEEGPGVVF WHAKGWTLFQ 
EIIAYMRRRL AEDYDEVNAP QMLDKSLWET SGHWEWYREN MFAAQSAGDE AEDKRWFAIK 
PMNCPGHVLI FKHGLKSYRE LPIRLAEFGV VHRYEPSGAM HGLMRVRGFT QDDAHIFCTE 
QQLADECLKI NDLILSTYED FGFEGELTVK LSTRPDKRVG SDAAWDHAES VMTAVLEQIK 
ARSGNRVKTS INPGEGAFYG PKFEYVLRDA IGREWQCGTT QVDFNLPERF GAFYIDEHSN 
KVAPVMVHRA ICGSLERFAG ILIEHFAGHF PLWLAPVQAV VATITSDADD YAREVVAAAR 
RAGLRIEIDL RNEKINYKVR EHSLAKVPAL LVVGKKEAES RSVSIRRLGS DGQTVLPTDE 
AIAALVEEAT PPDIKRENNP K