| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1648 |
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| Symbol | |
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| ID | 4032901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1849361 |
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| End bp | 1850149 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637970122 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_576926 |
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| Protein GI | 92117197 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCTCTC CGCCAGAACT TCCGCCTGAG CCCCGGCGAG AGCCGATCCT GACCCTGCCA
GGGGCATTGA CCGCCTATAT CGGCCTTCTT GCGATCGTTC ATGTCGTGTG GTCGGCGCTT
CCGCCCGATC TGGAATACTG GACCATCGAG ACGTTCGGCT TCATTCCGAA GCGGTACGAT
CCGAGTCTGC TGACGGCGAC GTTCCCGGGA GGCGGCGGCG CCAAGGTCTG GACTTTCGTG
ACCTATTCGC TGCTGCACGC CAACCTCAGT CATATCGGCT TCAACGTGCT GTGGTTGCTG
CCCTTCGGCA GCGCTGTAGC GCGCCGCTTC GGCGCCTTCA GGTTTTTTCT TTTCATGGCG
GTGACCGCCG TCGCCGGCGC GGCCGCGCAT CTTGTGACCC ACGAGCACAG CATTGCGCCG
ATGATCGGCG CGTCGGCGTC GGTGTCGGGT GCGATGGCGG CGGCGATCCG CTTCGCCTTC
GTGCGCGGCA GCTTTCTGTC CTTTCGCGGC AATGACGCCG ACGCGGCGGC CCAGGTACCC
GCGCTGTCGC TGATGCGCGC GCTGCAAAAT CCGCGCGTGC TCGCGTTTCT CGCGATCTGG
TTCGGCATCA ATATCATCTT CGGGATGGGA TCGGTCGCAG TTGGCGCCGA GTCCGGCAGC
GTTGCCTGGC AGGCCCATAT CGGGGGCTTC ATGGCAGGCC TTGTATTGTT TTCGCTGTTC
GATCCGGTGC CTCGTCCGCC GCGCGATGCT GCGAGTGCGT CGTCCGGCGG CGCGGATCGG
GTCCCGTAG
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| Protein sequence | MVSPPELPPE PRREPILTLP GALTAYIGLL AIVHVVWSAL PPDLEYWTIE TFGFIPKRYD
PSLLTATFPG GGGAKVWTFV TYSLLHANLS HIGFNVLWLL PFGSAVARRF GAFRFFLFMA
VTAVAGAAAH LVTHEHSIAP MIGASASVSG AMAAAIRFAF VRGSFLSFRG NDADAAAQVP
ALSLMRALQN PRVLAFLAIW FGINIIFGMG SVAVGAESGS VAWQAHIGGF MAGLVLFSLF
DPVPRPPRDA ASASSGGADR VP
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