Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1624 |
Symbol | |
ID | 4033318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1825902 |
End bp | 1827134 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637970099 |
Product | RNA methyltransferase TrmH, group 1 |
Protein accession | YP_576903 |
Protein GI | 92117174 |
COG category | [J] Translation, ribosomal structure and biogenesis [S] Function unknown |
COG ID | [COG0565] rRNA methylase [COG2852] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGCA CCGACAGGAC AAAAACCGGC ATCGACGCGG TCGGCCCCAC CGTGATTCTG GTCGAGCCGC AGCTCGGCGA GAACATCGGC ATGGCGGCGC GCGCCATGGG CAATTTCGCC CTGACGCGGC TGCGCATCGT CAACCCGCGC GACGGCTGGC CCAATGTCGC GGCCCAGCGC GCGGCGGCGG GCGCCGACCA TATCCTCAAG CACGTCGAGC TGTTCGACAC CGTGGAGGCC GCGGTCGCCG ACTGCACGCT GCTGTTAGCG ACCACCGCGC GCGCCCACGA TCAGGCCAAG CCGGTGGTGG CGCCGGAAGC GGCGGCCGCT GAGGCGACCG TGCAGATCGC GGCCGGCGGC CATGTCGGCA TCCTGTTCGG CCGCGAGCGC GCCGGCCTGC TGAATGAAGA GGTGGCGATG GCCGACCGCA TCATCACCTA TCCCGTCAAT CCGGGCTTTG CCTCGCTCAA CCTGGCGCAG GCGGTGCTGC TGATGGGTTA CGAATGGTTC AAACTGGTGA CGCGGGCCGC GCTGCCGTTC GCCATGCCGG AACGCTCGGA GCGGGCCTCC CAGCACCAGA TGCAGGCGTT CTTCGACAAT CTCGTCAGCG AACTCGACAA GGTCGAATTC CTCCGCCCGG CCGAGAAGCG CGACACCATG CTGGTCAACC TGCGCAACAT CTTCACCCGC ATGGAGCCGA CCAAGCAGGA CATGCACACG CTGCACGGCG TGGTCATGGC CATCGCTGAG GGGCGCAAGG GACCGGCCAA GGGCGGGGTG CTCGACGGCG CGCAAGCGAC GCGGCTGCGG GCATTGCTGG CCGAGCAGGG GCCGGGAGGG GCTTCCGCAG ACAGCAGCAG CACGGTGCGC GGGCTGGCGC GGCTGCTCAG ACGAAATCCG ACCGACGCCG AGCGCATCCT GTGGCAATCG CTAACCCGCG ACCGCCGCTT CGCCGGCCAG TTCAAGCGGC AGACACCGGT CGGCCGGCAC ATTCCGGATT TCGTGTCGTT CGTGCAACGC ATCGCGATCG AACTGGTGAA TCCGAACGAG AGCGACACCA TCGCGCGCGA CCGCGCAGGC CGTGGTGCCT GGCTGGCCGA GCGCGGCTAT CGCGTCGTCG AGATCGAGGC GGCGGCGGTG GAGGCGGATT TGGCGCGCGT GCTGGACGGG TTGGCGGTGA GGATGGCGGC GGGGGAGGGC GAGGGGGCCG TAGGGCACGA TGGGCAGCGA TGA
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Protein sequence | MSGTDRTKTG IDAVGPTVIL VEPQLGENIG MAARAMGNFA LTRLRIVNPR DGWPNVAAQR AAAGADHILK HVELFDTVEA AVADCTLLLA TTARAHDQAK PVVAPEAAAA EATVQIAAGG HVGILFGRER AGLLNEEVAM ADRIITYPVN PGFASLNLAQ AVLLMGYEWF KLVTRAALPF AMPERSERAS QHQMQAFFDN LVSELDKVEF LRPAEKRDTM LVNLRNIFTR MEPTKQDMHT LHGVVMAIAE GRKGPAKGGV LDGAQATRLR ALLAEQGPGG ASADSSSTVR GLARLLRRNP TDAERILWQS LTRDRRFAGQ FKRQTPVGRH IPDFVSFVQR IAIELVNPNE SDTIARDRAG RGAWLAERGY RVVEIEAAAV EADLARVLDG LAVRMAAGEG EGAVGHDGQR
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