Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1621 |
Symbol | alaS |
ID | 4033315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1821179 |
End bp | 1823872 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970096 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_576900 |
Protein GI | 92117171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCGAT GGAACACAAT GAGCGGCGTT AACGACATCA GGTCGGCGTT TCTGAACTAC TTCGCGGCCA ACGGCCACGA GATCGTGCCC TCATCGCCGC TGGTTCCGCG CAACGATCCG ACGCTGATGT TCACCAACGC GGGCATGGTG CAGTTCAAGA ACGTCTTTAC GGGCGTCGAG AAGCGGCCCT ATCAGCGCGC CACCACCTCG CAGAAATGCG TGCGCGCCGG CGGCAAGCAC AACGACCTCG ACAATGTCGG CTATACCGCG CGGCACCACA CCTTCTTCGA GATGCTCGGC AACTTCTCGT TCGGCGACTA CTTCAAGGAC CGCGCCATCG AACTGGCGTG GAAACTGGTG ACTGAGGAAT TCGGCCTGCC GAAGGACAAG CTCATCGCCA CCGTCTACAT CGACGACGAT GAGGCGTTCG GACTCTGGAA GAAGATCGCA GGCCTGCCGG ACTCGCGCAT CATCCGCATC GCCGGCGCCG ACAATTTCTG GCAGATGGGA GACACCGGCC CGTGCGGTCC GTGCTCGGAG ATCTTCTACG ATCACGGCGA CAAAATTCCC GGCGGGCCTC CGGGATCGCC GGACGAGGAT GGCGACCGTT TCGTCGAGAT ATGGAATCTC GTATTCATGC AATACGAGAA GCTGCCGGAC GGCAGCCGCC TCAACCTGCC GAAGCCGTCG ATCGACACCG GCGCCGGTCT TGAGCGCGTG GCCGCCGTGC TTCAGGGCAA GCACGACAAC TACGACATCG ACCTGTTCGT CGCGCTGATC CGCGCCGCGG CCGATCTGAC CGGCGCGGAC CCGCATGGCC CGATGAAGGC GTCGCTGCGC GTGATCGCAG ATCACTTGCG CGCAACCTCG TTCCTGATCG CCGACGGCGT GCTGCCGTCG AACGAAGGCC GCGGCTACGT GCTGCGCCGG ATCATGCGGC GCGCGATGCG TCACGCCCAA TTGCTCGGCG CGAAGGAGCC GCTGATGTGG CGGCTGGTCG GTGTGCTGGT GCGCGAGATG GGGGAGGCCT TTCCCGAGTT GCAGCGCGCG CGGCCATTGA TCGAGGAAAC GCTGCGGCTC GAGGAGACGC GCTTCCGCAA GACGCTGGAG CGCGGGCTCT CTATTCTCGA CGAGAAGAGC GCGTCGCTGA AGAAAGGCGA CATGTTCGAC GGCGAGACCG CGTTCACGCT GTACGACACC TACGGCTTCC CGCTCGATCT GACGCAGGAC GCGTTGCGTG CGCGCGGCAT CGGCGTGGAT ATCGCATCGT TCACCGATGC GATGGAACAG CAGAAGGCCA AGGCGAGGGC GTCGTGGTCG GGCTCGGGCG AGGCCGCCAC TGAGACGATC TGGTTTCCTT TGCGCGAAAA ACTCGGGGCC ACGGAATTTC TCGGCTACGA GACCGAGATC GCGGAGGGCG CCGTCGCTGC GCTCGTGAAG GACGGCAAGG AAGCCGACAG CCTCAAGGCC GGCGAGAGCG GGGCCATCGT TTTGAACCAG ACGCCGTTCT ATGGCGAATC CGGCGGTCAG GTCGGCGACA CCGGCATTCT GACCGGCGAT GGCGTGCGCG TCCGCGTCAC CGATACGCAG AAGAAGGCAG GCGATCTGTT CGTGCATCTC GGCACCGTCG AGCAGGGCAC ACTCACGCCC GGCATGGCGC TGGCGCTGGA GGTTGACCGC GCCCGGCGCG GCGCGATCCG CGCCAACCAT TCCGCGACCC ATTTGCTGCA CGAGGCGCTG CGGCAGGTAC TCGGCGATCA CATCGCGCAG CGCGGCTCGC TGGTCGCGCC GGAGCGGCTG AGGTTCGATT TCGTCCACAA CAAACCGATC AGCGCGGACG AGCTGCGCCG CATCGAGGAC ATCGCCAACG ACGTCGTGTT GGAGAACGGC GAGGTGACGA CCCGCCTGAT GGCGGTGGAC GATGCGCGCG AGGCCGGGGC ACGGGCGCTG TTCGGCGAAA AGTACGGCGA CGAGGTGCGC GTGGTGTCCA TGGGCAGCAC GGGGCGGCAG GGCGCGGCGA GCAACGCGCT TGGCTGGTCG GTCGAGCTCT GCGGCGGCAC CCATGTGAAA CGCACCGGCG ATATCGGGCT GATCTCGGTG ACCGGCGAAA GCGCGGTCGC CTCGGGCGTG CGCCGGATCG AGGCGCTGAC CGGGCATCAT GCGCGCCATC ACGCCAACGA CGCCATCCAG CTTGCGAAAA CCGCCGCCGG CGAGTTGCGC ACCACGCTCG ACGATATGCC GCCGCGGATC ACCTCGCTGA TGGAGGAACG CAAGAAACTC GAGCGCGAAC TGTCCGAAGC GCGCAAGAAA CTCGCCATGG GCGGCGGGGC CGCGAGCGCA TCGTCCGGCG CGGCGGGCGT GCGCGATGTC GGCGGCATCA AGCTGATGGC GCGTTCGGTC GAGGGCATCG AGATCAAGGA TCTCAAGAAC CTCGCCGATC AGGGCAAGAA GCAACTGGGT TCGGGCGTGG TTGCGCTGGT CGCGACCAGC GGCGACGGCA AGGCGAGCAT CGTGGTCGGC GTGACGCCCG ATCTCGTGAC GCGCTTCTCG GCGGTCGATC TTGTGCGCAA GGCGTCGGAA GTGCTCGGCG GCAAGGGCGG CGGTGGCAAA CCGGACATGG CGCAGGCCGG CGGTCCGGAT GGCGCCAAAG CGGGCGCCGC GCTCGACGCC ATCGCCGCGG CAATGGGCGG CTAA
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Protein sequence | MTRWNTMSGV NDIRSAFLNY FAANGHEIVP SSPLVPRNDP TLMFTNAGMV QFKNVFTGVE KRPYQRATTS QKCVRAGGKH NDLDNVGYTA RHHTFFEMLG NFSFGDYFKD RAIELAWKLV TEEFGLPKDK LIATVYIDDD EAFGLWKKIA GLPDSRIIRI AGADNFWQMG DTGPCGPCSE IFYDHGDKIP GGPPGSPDED GDRFVEIWNL VFMQYEKLPD GSRLNLPKPS IDTGAGLERV AAVLQGKHDN YDIDLFVALI RAAADLTGAD PHGPMKASLR VIADHLRATS FLIADGVLPS NEGRGYVLRR IMRRAMRHAQ LLGAKEPLMW RLVGVLVREM GEAFPELQRA RPLIEETLRL EETRFRKTLE RGLSILDEKS ASLKKGDMFD GETAFTLYDT YGFPLDLTQD ALRARGIGVD IASFTDAMEQ QKAKARASWS GSGEAATETI WFPLREKLGA TEFLGYETEI AEGAVAALVK DGKEADSLKA GESGAIVLNQ TPFYGESGGQ VGDTGILTGD GVRVRVTDTQ KKAGDLFVHL GTVEQGTLTP GMALALEVDR ARRGAIRANH SATHLLHEAL RQVLGDHIAQ RGSLVAPERL RFDFVHNKPI SADELRRIED IANDVVLENG EVTTRLMAVD DAREAGARAL FGEKYGDEVR VVSMGSTGRQ GAASNALGWS VELCGGTHVK RTGDIGLISV TGESAVASGV RRIEALTGHH ARHHANDAIQ LAKTAAGELR TTLDDMPPRI TSLMEERKKL ERELSEARKK LAMGGGAASA SSGAAGVRDV GGIKLMARSV EGIEIKDLKN LADQGKKQLG SGVVALVATS GDGKASIVVG VTPDLVTRFS AVDLVRKASE VLGGKGGGGK PDMAQAGGPD GAKAGAALDA IAAAMGG
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