| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1618 |
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| Symbol | |
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| ID | 4033310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1816214 |
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| End bp | 1819090 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970093 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_576897 |
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| Protein GI | 92117168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.89287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC GTGAAGAGCC CGCCACCACC TTCGCGCGCC GCCATATCGG CCCGTCGTCA
CGCGATATCG CCGCGATGCT GGAAACCGTC GGCGCGAAGA GCCTCGCGGC ATTGATGAAC
GAGGCGCTGC CGCCGTCGAT CCGGCAGGCG GCGCCGCTCG ATCTCGGCCA AGGCTTAAGC
GAAGGCTTAA GCGAAACCGA AGCGCTGGCG CACATGCAGA GTCTCGCCGC GCAGAACCAG
GCGTTCACCT CGCTGATCGG GCAAGGCTAT TCCGGCACGA TCCTGCCGGC GGTGATCCAG
CGCAACATCC TGGAAAACCC GGCGTGGTAC ACAGCCTACA CGCCCTATCA GCCGGAAATC
AGCCAGGGGC GGCTGGAAGC GCTGTTCAAT TTCCAGACCA TGATCTGCGA CCTCACCGGT
CTCGATGTCG CCAACGCCTC GCTGCTCGAC GAAGCGACCG CGGTGGCCGA AGCGATGGCG
CTCGCCGAGC GCGCATCATC GGTGAAAACA AAAGCCTTCT TCGTCGATCA CGAGGTGCAT
CCGCAGACGC TGGCGGTGCT GCGCACCCGC GCCGAACCGC TGGGCTGGAC GCTCGTCACC
GGCGATCCGC TGCGCGATCT CGACAAGGCG GACGTGTTCG GCGCGGTGCT GCAATATCCG
GGCACATCCG GCGTGGTGCG CGACCTGCGC CCCGCGATCT CAACACTGAA GGCCAAGGGC
GGTCTTGCGG TGGTCGCCGC CGACCTGCTG GCGCTGACGC TGCTGGCCTC CCCCGGCGTG
CTCGGCGCCG ACATCGCAGT TGGATCGGCG CAACGCTTCG GCGTGCCGAT GGGCTATGGC
GGCCCGCACG CGGCCTACAT GGCGGTGCGC GACACGCTGA AGCGGCTGCT GCCCGGCCGC
ATCGTCGGCC TCTCCGTGGA CTCCCGCGGG GCACCGGCCT ATCGCCTCGC TTTGCAGACC
CGCGAGCAAC ATATCCGCCG CGAGAAAGCA ACCTCCAACA TCTGCACCGC GCAGGTGCTG
CTGGCGGTGA TCTCCTCGAT GTACGCAGTC TATCATGGCC CCGAAGGACT GGCGCAGATC
GCGCGCACCG TGCATCGCCG CACCGCGACA TTGGCGGCGG GACTGACGAG GCTCGGCTTC
GCGCCGCTCA ACGATGCAGC TTTCGATACG CTGACCGTGA GCGTCGGCGA CCGGCAAAAC
GAGATTGCCG GGCGCGCGCT CAGCCAGGGC ATCAACCTGC GGATCAACGC CGACCATACG
CTCGGCATCG CGCTCGACGA ACTCACCACG CCGGAGATCG TCGAAGCGGT GTGGCGCACA
TTCGGCGCCG CGTTCTCTTA CGCCGACGTC GAAGCGCACG CCCCCGACCT GCTGCCTGCC
GATCTCGGCC GCAGAACAGC CTATCTGACC CATCCGGTAT TTCACGCGCA CCGCTCGGAA
ACCGAACTGC TGCGCTACAT GCGAAAGCTC AGCGACCGCG ACCTTGCACT CGACCGCGCG
ATGATCCCGC TCGGCTCCTG CACGATGAAG CTCAACGCCA CCACCGAAAT GATTCCGCTG
ACGTGGCCGG CATTCGCGGG CCTGCATCCG TTCGCGCCGT GCGAGCAGGC GGAGGGTTAT
TACGCGCTGT TCGAAGAATT TGAACAATGG CTGATCGACA TCACCGGCTA CGATGCGATC
TCGCTGCAGC CCAACTCCGG CGCACAGGGC GAATATGCCG GGCTGCTGGC GATCCGCGGC
TATCACGCAG CGCGCGGCGA TAGTCACCGC ACGGTGTGCC TGATCCCCTC CTCGGCGCAC
GGCACCAATC CGGCCTCCGC CAACATGGCC GGCATGGAGG TCGTGGTGGT GGCCTGCGAT
GCGCGCGGCG ATGTCGACGT CGACGATCTC AGGGCCAAGG CGGCGCAGCA CGCCGACCGG
CTCGCCGCGA TCATGATCAC CTATCCCTCG ACGCACGGCG TGTTCGAGGA GCGCATCCGC
GAGATCTGCG ACATCGTGCA TAGCCACGGC GGACAGGTCT ATCTCGACGG CGCCAACATG
AACGCGCAAG TCGGCCTGTC GCGGCCCGGC GATTACGGCG CCGACGTCAG CCATCTCAAC
CTGCACAAGA CCTTTTGCAT CCCGCACGGC GGCGGCGGAC CGGGCATGGG CCCGATCGGC
GTGAAAGCGC ACCTCGCATC CTTCCTTCCC GGCCACCCCG CGACCGACGG CGCCACGCCG
CCCGCGGTCG GAGCGGTCTC GGCGGCGCCG TTCGGCTCGG CCTCGATCCT GACCATTTCC
TACATCTACG TCCTGATGAT GGGCGGCGAA GGCCTGACGC GCGCCACCGA AGTCGCGATT
CTCAACGCCA ACTATGTCGC ACAACGGCTC GATCCGCACT TTCCGGTGCT GTACCGCAAC
GTGAAGGGCC GGGTCGCGCA TGAATGCATC ATCGATCCCC GCGCGCTGAA GGCCGAAACC
GGCGTCACCG TGGACGATAT CGCCAAGCGG CTGATCGACT ACGGCTTCCA TGCCCCGACC
ATGAGTTTTC CGGTACCGGG CACGTTGATG ATCGAGCCGA CCGAATCCGA ATCGAAGGCG
GAACTGGATC GATTCTGCGA CGCCATGATC GCGATCCGGC GAGAAATCGC GGAGATCGAG
GCCGGACGCT GGAGCGTCGA GGCATCGCCG CTGCGCCACG CGCCGCATAC GGTGCACGAC
ATCGCCGACG ATACCTGGTC TCGGCCCTAC AGCCGGGCCC AGGGCTGCTT TCCGGCTGGC
ACCTCGCGGT TGGACAAATA CTGGTGCCCG GTCGGACGAG TCGACAATGC CTACGGCGAT
CGCAACCTCG TCTGTTCCTG CCCGCCGATG GAAGACTACG CGCAGGCGGC GGAGTAG
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| Protein sequence | MTAREEPATT FARRHIGPSS RDIAAMLETV GAKSLAALMN EALPPSIRQA APLDLGQGLS
EGLSETEALA HMQSLAAQNQ AFTSLIGQGY SGTILPAVIQ RNILENPAWY TAYTPYQPEI
SQGRLEALFN FQTMICDLTG LDVANASLLD EATAVAEAMA LAERASSVKT KAFFVDHEVH
PQTLAVLRTR AEPLGWTLVT GDPLRDLDKA DVFGAVLQYP GTSGVVRDLR PAISTLKAKG
GLAVVAADLL ALTLLASPGV LGADIAVGSA QRFGVPMGYG GPHAAYMAVR DTLKRLLPGR
IVGLSVDSRG APAYRLALQT REQHIRREKA TSNICTAQVL LAVISSMYAV YHGPEGLAQI
ARTVHRRTAT LAAGLTRLGF APLNDAAFDT LTVSVGDRQN EIAGRALSQG INLRINADHT
LGIALDELTT PEIVEAVWRT FGAAFSYADV EAHAPDLLPA DLGRRTAYLT HPVFHAHRSE
TELLRYMRKL SDRDLALDRA MIPLGSCTMK LNATTEMIPL TWPAFAGLHP FAPCEQAEGY
YALFEEFEQW LIDITGYDAI SLQPNSGAQG EYAGLLAIRG YHAARGDSHR TVCLIPSSAH
GTNPASANMA GMEVVVVACD ARGDVDVDDL RAKAAQHADR LAAIMITYPS THGVFEERIR
EICDIVHSHG GQVYLDGANM NAQVGLSRPG DYGADVSHLN LHKTFCIPHG GGGPGMGPIG
VKAHLASFLP GHPATDGATP PAVGAVSAAP FGSASILTIS YIYVLMMGGE GLTRATEVAI
LNANYVAQRL DPHFPVLYRN VKGRVAHECI IDPRALKAET GVTVDDIAKR LIDYGFHAPT
MSFPVPGTLM IEPTESESKA ELDRFCDAMI AIRREIAEIE AGRWSVEASP LRHAPHTVHD
IADDTWSRPY SRAQGCFPAG TSRLDKYWCP VGRVDNAYGD RNLVCSCPPM EDYAQAAE
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