Gene Nham_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1578 
Symbol 
ID4033055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1782579 
End bp1782848 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID637970053 
Producttype III secretion protein 
Protein accessionYP_576859 
Protein GI92117130 
COG category[S] Function unknown 
COG ID[COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 
TIGRFAM ID[TIGR00789] flhB C-terminus-related protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0759274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGG AGACCAAGGA TCAAGTCGCG GTCGCCCTTC ACTATGACAA GGGCAGCGGC 
GCGCCGCGCG TGGTCGCCAA GGGCAGGGGA TCGCTCGGCG CGAAGATCAT CGAGGTGGCG
AGAGAGCACG ACATTCCGAT CGAGGAAAAC GAGGTGCTGG CCGGCGCGCT GTCGCATGTC
GAGCTCGGTG ACGAGATTCC GTCTGAGCTG TACAAAGCCG TCGCCGAGGT GCTGGTGTTC
GTGCTGCGGC TGTCGGGGCG GGCGCCCTGA
 
Protein sequence
MSLETKDQVA VALHYDKGSG APRVVAKGRG SLGAKIIEVA REHDIPIEEN EVLAGALSHV 
ELGDEIPSEL YKAVAEVLVF VLRLSGRAP