| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1572 |
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| Symbol | |
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| ID | 4033146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1775221 |
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| End bp | 1776627 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637970047 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_576853 |
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| Protein GI | 92117124 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0853453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGAA TCAGTGCTTT GCTTGCGGCG GCTCTGTGTG TCGTCGTCGT ATCCGGCAGC
GTCAACTCTG CAACGGCGCA GGATCGCCGG GTGCCGGCCT CCCAGGCCGA GCTTCGGTTG
TCCTATGCGC CGATCGTGCA GCGGGTGGCG CCGGCCGTGG TCAACGTCTA TGCCGCCAAG
GTGATCCAGC ACCGCAACCC GCTTCTCGAC GACCCGATCT TTCGCCGCTT CTTCGGCGTT
CCCGGCCAGC AGCCGGAACA GATGCAGCGT TCGCTCGGCT CGGGGGTGAT GGTCGATCCG
TCCGGGCTTG TCGTGACTAA CAATCACGTG ATCGAGGGCG CCGATCAGGT CAAGGTCGCC
TTGTCGGACA AGCGCGAGTT CGAGGCCGAG ATCGTGCTCA AGGACACGCG GACCGATCTC
GCGGTCCTGC GGCTGAAGGG TGTGCATGAG AAGTTTCCGA CGCTCGATTT TGCCAATTCG
GATGAGTTGC AGGTCGGAGA TGTCGTCATC GCGATCGGAA ACCCGTTCGG CGTCGGGCAG
ACGGTGACGC ACGGCATCAT TTCGGCGCTG GCGCGCACAC AGGTCGGTAT CACCGACTAT
CAGTTCTTCA TCCAGACCGA TGCGGCGATC AATCCGGGCA ACTCCGGCGG CGCGCTGGTC
GATATGACGG GCCATCTTGC AGGCATCAAC ACGGCGATCT TCTCGCGCTC GGGAGGATCG
CAGGGCATCG GCTTCGCGAT TCCGGCCAAC ATGGTGCGGG TCGTCGTGGC GTCCGCCAAG
AGCGGCGGCA AGGCCGTGAA GCGGCCCTGG CTCGGCGCGC GACTGCAGGC GGTGACGCCG
GAAATTGCCG AAACCATCGG CCTCAAGGCG CCCGCCGGCG CGCTGGTCGC CAGCGTTGCG
CCGGGAAGTC CGGCGGAGCG GGCCGGCCTC AAGCTCTCCG ATTTGATCCT GTCGATCGAC
GGACAGCCTG TCGAGGACCC CAATGCGTTC GACTATCGCT TCGCGACGCG CCCGCTCGGT
GGCACGTCGC AAGTGGAAGT TCAACGCAAT GGCAGGCTGA TGAAACTCGC TGTTCCGCTG
GAGACGGCGC CGGATACAGG TCGAGACGAG ATCGTGATTA CCGCGCAATC GCCGTTCCAG
GGCGCAAAGG TTGCGAACAT TTCGCCGGCG CTTGCCGACG AGCTGCATCT CGATTCCAGC
GCCGAAGGCG TCGTGGTGAC TGCGCTGACC GATGATGGAA TGGCCGCGAA TGTCGGCTTC
AGGAAAGGCG ACATCATCCT GTCGGTCAAC AACAAGAAGA TCGTCAAGAC GGCCGATCTC
GAACGGGCCG TTAGCGAAGC CAGGCGGCTC TGGCGCATCA CCCTGATGCG CGGCGGCCAG
CAGATTCAAG TCATGCTCGG CGGATGA
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| Protein sequence | MSRISALLAA ALCVVVVSGS VNSATAQDRR VPASQAELRL SYAPIVQRVA PAVVNVYAAK
VIQHRNPLLD DPIFRRFFGV PGQQPEQMQR SLGSGVMVDP SGLVVTNNHV IEGADQVKVA
LSDKREFEAE IVLKDTRTDL AVLRLKGVHE KFPTLDFANS DELQVGDVVI AIGNPFGVGQ
TVTHGIISAL ARTQVGITDY QFFIQTDAAI NPGNSGGALV DMTGHLAGIN TAIFSRSGGS
QGIGFAIPAN MVRVVVASAK SGGKAVKRPW LGARLQAVTP EIAETIGLKA PAGALVASVA
PGSPAERAGL KLSDLILSID GQPVEDPNAF DYRFATRPLG GTSQVEVQRN GRLMKLAVPL
ETAPDTGRDE IVITAQSPFQ GAKVANISPA LADELHLDSS AEGVVVTALT DDGMAANVGF
RKGDIILSVN NKKIVKTADL ERAVSEARRL WRITLMRGGQ QIQVMLGG
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