| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1569 |
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| Symbol | |
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| ID | 4033143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1772356 |
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| End bp | 1773375 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637970045 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_576851 |
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| Protein GI | 92117122 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.246587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGATCC AGAAAAATTG GCAAGAACTT ATTCGGCCGA ACAAGCTGCA CGTCGTTCCC
GGCAGTGATC CCTCGCGCTT CGCGACCCTG ATCGCCGAGC CGCTCGAGCG CGGTTTCGGC
CAGACGCTCG GTAATGCGCT GCGCCGCATC CTGCTGTCGT CGCTACAGGG TGCTGCGGTG
CAGTCGGTGC ACATCGACGG CGTGCTACAC GAGTTCTCCT CGATCGCGGG CGTTCGCGAG
GACGTCACCG ACATCGTGCT GAACATCAAG GACATCTCGA TCAAGATGCA GGGCGAAGGC
CCGAAGCGCA TGGTCGTGAA GAAGCAGGGC CCCGGCACCG TTACCGCAGG CGACATCCAG
ACGGTCGGCG ATATCGTGGT GCTCAATCCC GACCTTCCGA TCTGTACCCT CGACGACGGC
GCCGAGATTC GCATGGAGTT CACCGTTGCC TCCGGCAAGG GCTACGTCGC CGCCGAGCGC
AACCGGCCCG AGGACGCGCC GATCGGACTG ATCCCTGTCG ACAGCCTGTA TTCGCCCGTG
CGTAAGGTAT CCTACAAGGT CGAGAACACC CGCGAGGGCC AGATTCTCGA CTACGACAAG
CTGACGATGA TGATCGAGAC CAACGGCGGC GTGACGCCGG AGGACGCCGT GGCCTTCGCC
GCGCGCATCC TGCAGGATCA GCTCAACGTC TTCGTCAACT TCGAGGAGCC GCGCAAGGAA
GTCGCCACCG AGATCATCCC GGATCTGGCG TTCAACCCGG GATTCCTCAA GAAAGTGGAC
GAACTGGAAC TGTCGGTGCG CTCCGCAAAC TGCCTGAAGA ACGACAACAT CGTCTACATC
GGCGACCTGG TGCAGAAATC GGAAGCGGAG ATGCTGCGCA CGCCGAACTT CGGCCGCAAG
TCGCTAAACG AAATCAAGGA AGTGCTGGCC CAGATGGGTC TGCATCTCGG CATGGAAGTG
CCCGGCTGGC CGCCGGAGAA TATCGACGAA CTGGCCAAGC GCTTCGAGGA TCATTACTGA
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| Protein sequence | MTIQKNWQEL IRPNKLHVVP GSDPSRFATL IAEPLERGFG QTLGNALRRI LLSSLQGAAV
QSVHIDGVLH EFSSIAGVRE DVTDIVLNIK DISIKMQGEG PKRMVVKKQG PGTVTAGDIQ
TVGDIVVLNP DLPICTLDDG AEIRMEFTVA SGKGYVAAER NRPEDAPIGL IPVDSLYSPV
RKVSYKVENT REGQILDYDK LTMMIETNGG VTPEDAVAFA ARILQDQLNV FVNFEEPRKE
VATEIIPDLA FNPGFLKKVD ELELSVRSAN CLKNDNIVYI GDLVQKSEAE MLRTPNFGRK
SLNEIKEVLA QMGLHLGMEV PGWPPENIDE LAKRFEDHY
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