Gene Nham_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1568 
Symbol 
ID4033142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1771857 
End bp1772249 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID637970044 
Product30S ribosomal protein S11 
Protein accessionYP_576850 
Protein GI92117121 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0898739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGG AAGCTGCGAC ACGCGTCCGA CGTCGCGAAC GCAAGAACAT CGCGTCCGGC 
GTCGCGCATG TGAATTCGTC GTTCAACAAC ACCACCATCA CCATCACCGA CGCGCAGGGC
AATACGATCG CCTGGTCGTC GGCCGGAACG ATGGGCTTCA AGGGATCGCG CAAGTCGACG
CCCTATGCGG CGCAGGTGGC GGCGGAAGAC GTTTCCAAGA AGGCGCAGGA ACACGGTATG
CGCACCCTCG AGGTTGAGGT GGCGGGTCCG GGTTCGGGTC GCGAATCGGC GCTGCGCGCG
TTGCAGGCCG CGGGCTTCAC CGTCACCTCG ATCCGCGACG TGACGGCGAT ACCGCATAAC
GGTTGCCGTC CGCGCAAGCG CCGGCGCGTT TGA
 
Protein sequence
MGKEAATRVR RRERKNIASG VAHVNSSFNN TTITITDAQG NTIAWSSAGT MGFKGSRKST 
PYAAQVAAED VSKKAQEHGM RTLEVEVAGP GSGRESALRA LQAAGFTVTS IRDVTAIPHN
GCRPRKRRRV