Gene Nham_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1559 
SymbolrpsH 
ID4033133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1765559 
End bp1765957 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content61% 
IMG OID637970035 
Product30S ribosomal protein S8 
Protein accessionYP_576841 
Protein GI92117112 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGC ACGATCCGAT CAGCGACCTC ATCACCCGCA TCCGTAATGC GCAGATGCGC 
AACAAGTCCA AGGTTTCGAC CCCAGGCTCG AGGATGCGCG CCAATGTGCT GGAAGTCCTC
AAGAGCGAGG GCTATATCCG CGGCTACGCC AGCGTCGAGC ATTCCTCGGG CCGCAGCGAG
CTTGAAATCG AGCTGAAGTA TTTCGATGGC GAGCCGGTGA TTCGGGAGAT CGAGCGCATC
TCCAGGCCGG GGCGGCGCGT TTACGCCTCG GTTAAGAATC TGCCGCGCGT CAAGAACGGG
CTAGGAATTT CGGTGCTGTC GACGCCGAAG GGGATCATGG CCGACCACGA GGCGCGCGAC
GCGAACGTGG GCGGCGAAGT TCTCTTCACG GTGTTCTAG
 
Protein sequence
MSTHDPISDL ITRIRNAQMR NKSKVSTPGS RMRANVLEVL KSEGYIRGYA SVEHSSGRSE 
LEIELKYFDG EPVIREIERI SRPGRRVYAS VKNLPRVKNG LGISVLSTPK GIMADHEARD
ANVGGEVLFT VF