Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1552 |
Symbol | rplP |
ID | 4030706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1763040 |
End bp | 1763453 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637970028 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_576834 |
Protein GI | 92117105 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAAC CGAAGAAGAC CAAGTTCCGG AAGGCGCACA AGGGCCGCAT CCACGGCACC GCGTCGTCGG GCGCGACGCT GGCGTTCGGC CAGTTCGGCC TGAAGGCGAT GGCGCCCGAG CGCATCTCGG CGCGCCAGAT CGAAGCCGCG CGGCGCGCGC TGACGCGCCA CATGAAGCGC GCCGGTCGCG TCTGGATCCG TGTGTTCCCG GATGTGCCTG TATCGAAGAA GCCGGCCGAG GTTCGCATGG GCTCGGGCAA GGGAGCGCCG GAATTGTGGG TGGTGCGGGT CAAGCCGGGT CGGGTGCTTT TCGAGATCGA CGGCGTGGGC GCGCAGACCG CGAAGGAAGC GCTGACGCTC GCCGCCGCCA AGCTTCCGAT CAAGACGCGC TTCGTCGCGC GCATCGCGGA GTAA
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Protein sequence | MMQPKKTKFR KAHKGRIHGT ASSGATLAFG QFGLKAMAPE RISARQIEAA RRALTRHMKR AGRVWIRVFP DVPVSKKPAE VRMGSGKGAP ELWVVRVKPG RVLFEIDGVG AQTAKEALTL AAAKLPIKTR FVARIAE
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