Gene Nham_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1551 
SymbolrpsC 
ID4030705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1762317 
End bp1763012 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content64% 
IMG OID637970027 
Product30S ribosomal protein S3 
Protein accessionYP_576833 
Protein GI92117104 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAA AGATCAATCC AATCGGGCTG CGTCTGGGCA TTAACCGGAC CTGGGACTCC 
CGTTGGTATG CCGGCAAGAA CGAGTACGGC AGGCTGCTGC ACGAGGACGT CAGGATCCGC
GAGCTCCTGC ACAAGGAGCT CAAGCAGGCG GCCGTCGCGC GCATCGTGAT CGAGCGCCCG
CATAAGAAGT GCCGCGTCAC GATTCATTCG GCGCGTCCCG GCGTCGTCAT CGGCAAGAAG
GGCGCCGATA TCGACAAGCT TCGCAAGAGG GTTGCCGACA TCACTTCGTC CGACGTCGTC
ATCAACATCG TCGAGATTCG CAAGCCGGAG CTTGATGCCA CGTTGGTCGC CGAATCGATC
GCGCAGCAGC TTGAGCGCCG CGTCGCGTTC CGCCGCGCGA TGAAACGCGC CGTACAGTCG
GCGATGCGTC TCGGCGCCGA GGGCATTCGT ATCAACTGCT CGGGCCGTCT CGGCGGTGCC
GAAATCGCTC GCATGGAGTG GTATCGCGAA GGCCGCGTAC CGCTGCACAC GCTGCGCGCC
GACGTTGATT ACGGCGTCGC CACCGCGTTC ACGACGTTCG GCACCTGCGG CGTCAAGGTC
TGGATCTTCA AGGGCGAAAT CCTCGAGCAC GATCCGATGG CCCAGGACAA GCGCCTGGCT
GGTGACGACA ACCGTCCGCG CCGCGACGCG GCTTGA
 
Protein sequence
MGQKINPIGL RLGINRTWDS RWYAGKNEYG RLLHEDVRIR ELLHKELKQA AVARIVIERP 
HKKCRVTIHS ARPGVVIGKK GADIDKLRKR VADITSSDVV INIVEIRKPE LDATLVAESI
AQQLERRVAF RRAMKRAVQS AMRLGAEGIR INCSGRLGGA EIARMEWYRE GRVPLHTLRA
DVDYGVATAF TTFGTCGVKV WIFKGEILEH DPMAQDKRLA GDDNRPRRDA A