Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1546 |
Symbol | rplD |
ID | 4030700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1759831 |
End bp | 1760451 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970022 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_576828 |
Protein GI | 92117099 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTGA ACGTCACCAC CCTCGAAGGC AACGCCGCGG GCTCGGTCCA ACTCTCGGAC GGGATTTTCG GCCTGGAGCC GCGCAAGGAT CTGATCCAGC GCTGCGTCAA CTGGCAGCTC GCCAAGCGTC AGGCCGGCAC CCACAAGACC AAGGGCCGCG CGGAAATCTG GCGCACCGGC AAGAAGATGT TCAAGCAGAA GGGCACCGGC AATGCCCGTC ACGGCTCGGC CCGCGTGCCG CAGTTCCGTG GCGGTGGCCG CGCGTTCGGC CCGGTCGTTC GCAGCCATGC CCACGATCTG CCGAAGAAGG TGCGCGCGCT GGCGCTGCGC CACGCACTGT CGGCGAAGGC CAAGGACGGC GGTCTAATCG TCATCGACAG CGCTGAACTG AATGAGGCCA AGACCAAGGC CTTGGTGGGC CACTTTTCCG GCCTCGGCCT GACCAACGCG CTGATCGTGG ACGGCGCCGC GGTCCATGCC GGGTTCGCGA CCGCCGCGCG CAACATTCCG AACATCGACG TGCTGCCGAT CCAGGGCATC AACGTTTACG ACATCCTGCG CCGTCGGAAA CTGGTGCTGA CCAAGGCGGC GGTTGATGCG TTGGAGGCGC GCTTCAAATG A
|
Protein sequence | MELNVTTLEG NAAGSVQLSD GIFGLEPRKD LIQRCVNWQL AKRQAGTHKT KGRAEIWRTG KKMFKQKGTG NARHGSARVP QFRGGGRAFG PVVRSHAHDL PKKVRALALR HALSAKAKDG GLIVIDSAEL NEAKTKALVG HFSGLGLTNA LIVDGAAVHA GFATAARNIP NIDVLPIQGI NVYDILRRRK LVLTKAAVDA LEARFK
|
| |