| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1540 |
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| Symbol | rpsL |
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| ID | 4030694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1754398 |
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| End bp | 1754769 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637970016 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_576822 |
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| Protein GI | 92117093 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.966808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGACGA TCAACCAACT GATCGCAAGT CCGCGCGTCA TACAGAAGTC GCGCAAAAAG
GTGCCTGCGT TGCAGCAGTC GCCGCAAAAG CGCGGCGTGT GCACACGTGT TTACACCACG
ACTCCGAAGA AGCCGAACTC GGCGCTGCGT AAGGTCGCAA AGGTGCGTCT TACCAATGGC
TTCGAGGTCA TCGGTTACAT TCCGGGTGAG GGGCATAACC TTCAGGAACA TTCCGTGGTC
ATGATCCGCG GCGGTCGCGT CAAGGATTTG CCCGGCGTGC GCTATCACAT CCTCCGCGGC
GTCCTCGACA CCCAGGGCGT CAAGAACCGC AAGCAGCGTC GTTCGAAATA CGGCGCGAAA
CGTCCGAAAT AA
|
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| Protein sequence | MPTINQLIAS PRVIQKSRKK VPALQQSPQK RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVIGYIPGE GHNLQEHSVV MIRGGRVKDL PGVRYHILRG VLDTQGVKNR KQRRSKYGAK
RPK
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