Gene Nham_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1537 
Symbol 
ID4030691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1751902 
End bp1752612 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID637970013 
Producthypothetical protein 
Protein accessionYP_576819 
Protein GI92117090 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACA GACCAAAAAA CGGCCTGTTG GCGAGCATAC CGGACTCGGA ATGGCTCGAC 
GTTCAGAGCC TGTGCGAGTC GATCAAACTG TCACTGGGCC GCGTGCTGTA CGAACCACGC
GGCCCATTCG ATTACGTGTA CTTTCCGGAA ACGGCGATTA TCTCCAACGT CGCCCCGCTA
AAGGCCGACA AGACGGCAGA AACCTCGACC ACCGGACGGG AGGGGATGGT TAACGTCGGA
GCTATCATGG GCGACGACCA ATCGATGCAC CGCGCCGTCG TCCAGGTGTC CGGTGACGCC
ATCCGTATTT CCTTTCGCGA GTTTCAGGAG CTGCAGGCAC GTTTGCCGGT ATTCCGGCGC
AAGCTCAACG CCTACTCACG TGCATTCCTC GGGCAAGTAA TGCAGTCCGT TGCATGCAAC
GCCAGCCATA CGCTCCTTCA GCGCTGCGCA CGATGGCTGT TGAAGTCTCA CGATCGCGTC
GAAGGTGACG AGCTTCGATT AACGCAGCAG TTCCTGGCCG AGATGCTGGT CGTCAGCCGT
GTGGCGGTTA ACGCAGAGCT GAAAAAATTT CAGCAACAGC AGGCTCTCAC ATACAACCGC
GGCATCATCA CGATATTGGA CCGCAAGCTA TTGGAGCGCA CATCCTGCGA GTGCTATCGC
GCGGTTCGGC GCGAATACGA CAGGCTGCTG CCCGGCTCGT TCACAAAATA A
 
Protein sequence
MVNRPKNGLL ASIPDSEWLD VQSLCESIKL SLGRVLYEPR GPFDYVYFPE TAIISNVAPL 
KADKTAETST TGREGMVNVG AIMGDDQSMH RAVVQVSGDA IRISFREFQE LQARLPVFRR
KLNAYSRAFL GQVMQSVACN ASHTLLQRCA RWLLKSHDRV EGDELRLTQQ FLAEMLVVSR
VAVNAELKKF QQQQALTYNR GIITILDRKL LERTSCECYR AVRREYDRLL PGSFTK