Gene Nham_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1521 
Symbol 
ID4032613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1727182 
End bp1728405 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID637969996 
Producthypothetical protein 
Protein accessionYP_576803 
Protein GI92117074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATA TGGTCAATTG GGCTCCGGTT CGTCGTCCAT CGATGAGCGA GTTCGCGGCG 
CGCCCGCCCC GGAGCGCAAC ACGCCGCGGG GCCGCGGCAC TCGCCTCAAT CGACATCGAC
CAATGGCGAA CGCTTGCCGA CCGCGCTGTC GAGCCGAACG CCTACCACCT CGCCGACTGG
CAGCTTCCGC TCGACGCATC GGCGCGCGAC CGGACCGATG CATCCGCGCT GACGGCGCAT
GACGGCTCAT CCGCGGCGTC CGGTGCCGGC GCTCTCATCG GCCTCATCCC CGTGATCTCC
GCCTGGAGAG CCTACCGACT TCCGTTGCCC GTTCTGGTCA GCGCCGATCC CTATGGAACC
CTCTGCACTC CGCTGCTCGA CCGCGGCCTC GCCAATGAAG CCGCGACGAC GCTGCTGCGC
GAGGCACGCG CCATCGGCCA ACGCGCGCTG ATCCTGCGCA ACGTCGCGCT CGACGGCGCG
GCCATGAAGG CCCTCACAGC AGCGCTTGAA CATGACGGCA TCAGGCCGCA TACGCTGCAT
GGCCATGTGC GGGCCTGCCT CGACGCAACA CGCGAGCCGG ATGAACTGCT GCGGGATGCG
CTCGGCGTCA AGAAGCTCAA GGAGTTGCGC CGCCAGCGCA ATCGGCTTGC GGACCATGGC
GAGGTTTCGT TTCAGGTCGC GCGTGCTCCC GGCGATGTTG CACAAGCGCT CGAAACCTTC
CTTGCGCTGG AAGCCAGTGG CTGGAAGGCG CGGTGTGGGA CCGCATTGCT CCAGCATGGC
GGCGATGCAG CCTTCATCCG CCGCGCGGCG CCGGCGCTTG CCGAACGAGA TCAGTGCGAA
ATCGTAACCC TGCGCGCAGG CCCGACCCCG GTGGCGGCGG CTATCGTGTT GCGTCATCAA
GACCGCGCGT TCTATTTCAA GCTCGGCGTC GACGAAAATT TCGCGAAGTT TTCACCCGGT
GTGCAGTTGA CGCTCGATCT CACGCGGCAC CTCTGCGCCG ACCCGGCGAT TACACTGGCG
GATTCCACGG CAAACCCGGG TCATCCGATG ATCGACCCGA TCTGGCGCGG TCGGCTTGCG
ATCGGCGATG TGCTGATCCC GCTTCGACGC CGCGACCCTG CCATTCCACT TGCAAGGGCG
GCGGTCGCGC TGCGCCGGCT AGCGCGCGTA GCCGTGCACC GCGCCGTTCA TGTTATCCGC
AAACGCCGGG AGAGAAATGC ATGA
 
Protein sequence
MVDMVNWAPV RRPSMSEFAA RPPRSATRRG AAALASIDID QWRTLADRAV EPNAYHLADW 
QLPLDASARD RTDASALTAH DGSSAASGAG ALIGLIPVIS AWRAYRLPLP VLVSADPYGT
LCTPLLDRGL ANEAATTLLR EARAIGQRAL ILRNVALDGA AMKALTAALE HDGIRPHTLH
GHVRACLDAT REPDELLRDA LGVKKLKELR RQRNRLADHG EVSFQVARAP GDVAQALETF
LALEASGWKA RCGTALLQHG GDAAFIRRAA PALAERDQCE IVTLRAGPTP VAAAIVLRHQ
DRAFYFKLGV DENFAKFSPG VQLTLDLTRH LCADPAITLA DSTANPGHPM IDPIWRGRLA
IGDVLIPLRR RDPAIPLARA AVALRRLARV AVHRAVHVIR KRRERNA