Gene Nham_1519 details

Gene Information

• Locus tag: Nham_1519
• ID: 4032611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 1725416
• End bp: 1726120
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637969994
• Product: peptidase M50
• Protein accession: YP_576801
• Protein GI: 92117072
• COG category: [R] General function prediction only
• COG ID: [COG1994] Zn-dependent proteases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAGCAC GAGGCCGCCG ATTGTCGGGC ATTTCACTCT ACACGCTGTC GGTCTGGGTG 
CTGCCGCTCG TCATCGCGAT CACCTTTCAT GAAGCCGCGC ACGGATTCGT CGCGCATCGG 
CTGGGCGACA ACACCGCCTG GCAACTCGGC CGCGTCAGCT TCAATCCGCT CAAGCATATC 
GATCCCTTCG GCACGGTGAT ATTGCCGGGG ATTCTGCTGC TGACGCACGC GCCGTTCCTG 
TTCGGCTACG CAAAACCTGT GCCGGTGAAC TTCCGAAATT TGAGCCATCC CCGCATCGAC 
ATGGTCTGGG TGGCGCTCGC CGGACCCGTC ACCAATATTT TGCTGGCACT GCTCGCGGCA 
CTGGCATTTC ACGGGCTCGG CCTGATCCCG GACAACAGCG TGCAATGGGT CGCCGACAAC 
CTGAAGAACG CGCTGATCAT CAATGTCATT CTTGCGGTGT TCAACATGCT GCCGATCCCG 
CCATTGGACG GCGGACGGGT CGCGGTCGGC CTGCTGCCGA ATGGTCTGGC GGTCCCGCTC 
TCCCGTCTGG AACCCTACGG ACTGCTGATC CTCGTCGGCG TCCTCCTGCT GCTACCGATG 
CTCGGCAGCC AGCTCGGTCT CAATCTTGAC GTGATCTCCA CCATCGTGAG AACAGTCACC 
GGTTTTGTGA TACAGCTTCT GCTGCTGGTC ACCGGCAATC TATGA 

 

Protein sequence

MKARGRRLSG ISLYTLSVWV LPLVIAITFH EAAHGFVAHR LGDNTAWQLG RVSFNPLKHI 
DPFGTVILPG ILLLTHAPFL FGYAKPVPVN FRNLSHPRID MVWVALAGPV TNILLALLAA 
LAFHGLGLIP DNSVQWVADN LKNALIINVI LAVFNMLPIP PLDGGRVAVG LLPNGLAVPL 
SRLEPYGLLI LVGVLLLLPM LGSQLGLNLD VISTIVRTVT GFVIQLLLLV TGNL