| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1510 |
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| Symbol | |
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| ID | 4032409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1716881 |
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| End bp | 1718068 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969985 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_576792 |
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| Protein GI | 92117063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGAG CCACCATGTC CCGGTTGCGA ACTCTCGGTT GGGCATCCCT CGTCGCGGTG
ATCGCCCTTG CGGGCGGTTA CGCGCTTTGG CAGCACAGCG CGAAAGAGCA TAACGGCGCG
GATCGAGCCG ACGCCGCAAC GGACAGCCCG GTCCCGGTCC AGATCGCAAC CGTGAAGAAG
AGCAATTTCC CGATCTATCT GACCGGACTC GGGACAGTTC AGGGTTTCAA CACCGTCGTG
GTGCGGACCC GTGTCGATGG CCAGATCGAC CGGATCGTCT TCAAGGAGGG CCAACTGGTC
CAGAGCGGCG ACCTGCTCGC CCATATCGAT CCGCGGCCAT TCCAGGCGGC GCTCGATCAG
GCCAAGGCCA AAAAGGCGCA GGATGAAGCC AATCTGGCCA ATGCCAACCT CGACTTGCGG
CGCTATACCC AGCTCGGCGA ATTCGCGACG CGGCAGCAGA CCGACACCCA GCGATCCACG
GTGCAGCAAC TCACCGCGCA GATCGCGGCG GACGAAGCCA CGATTTCCAA CGCGCAAACC
CAGCTCGACT ACACCAACAT CCGCGCGCCT ATCGCGGGCG TCACCGGCTT CCGTCAGGTC
GATCAGGGCA ACATCGTCAA CGCCTCGACG CAGACCGGCA TCGTCACCAT CGCGCAGATC
GAACCGATCG CGGTGATTTT CACCGCGCCG GAAGAGCAAC TGCCGCAGAT CAAGGACGCC
CTCGCCGCCG GGCCGCCAAA GACGATCGCG TACTCCACCG ACGGCAAGCG GATCCTGTCC
GAGGGAACGC TGGCGCTGAT CAACAATCAG GTCGACACCA CGAGCGGCAC CATCCGCCTC
AAGGCGATCT TCGAGAACAA GGATCACGTC CTGTGGCCCG GGCAGTCGGT CGCGACGCGG
TTGCTGGTGT CCACCCGGAG GAATGCCGTC GTGGCCCCCG ACGACGCCGT CAAGCACGGA
ACCGACGGAC TCTATGCCTA CGCCGTCAAT CAGGACAACA AGGCCGAGCT TCGCAACATC
AGGGTCGGGC CGTCGATCGA TGGCCAAACC GTCATCGAGG ACGGGCTGAC CCCCGGAGAC
CATGTTATAG TCGCTGGACA ATACCGGGTT CAGCCGGGGT CGGTCGTGAC CACCACAGTC
GCGGACTCCG AGCCCTCTGA GGGCAAGGCT GCTGGCAAGG CCCACTAG
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| Protein sequence | MLRATMSRLR TLGWASLVAV IALAGGYALW QHSAKEHNGA DRADAATDSP VPVQIATVKK
SNFPIYLTGL GTVQGFNTVV VRTRVDGQID RIVFKEGQLV QSGDLLAHID PRPFQAALDQ
AKAKKAQDEA NLANANLDLR RYTQLGEFAT RQQTDTQRST VQQLTAQIAA DEATISNAQT
QLDYTNIRAP IAGVTGFRQV DQGNIVNAST QTGIVTIAQI EPIAVIFTAP EEQLPQIKDA
LAAGPPKTIA YSTDGKRILS EGTLALINNQ VDTTSGTIRL KAIFENKDHV LWPGQSVATR
LLVSTRRNAV VAPDDAVKHG TDGLYAYAVN QDNKAELRNI RVGPSIDGQT VIEDGLTPGD
HVIVAGQYRV QPGSVVTTTV ADSEPSEGKA AGKAH
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