Gene Nham_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1503 
Symbol 
ID4032401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1707392 
End bp1708663 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content65% 
IMG OID637969977 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_576785 
Protein GI92117056 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACA AATCCGGCAG GCCTGTCGTC GTCGTCACGG GCATGGGCGT CGTGACCTCT 
CTCGGCTCCG GCAAGACCGA CAACTGGGCC AGACTTTGCG CGGGTGAGTC CGGCATCAGG
ACGATCACGC GGTTCCCGAC CGACGGCCTG AGAACCACGA TGGCGGGCAC GATCGATTTC
GTCCCGGTCG AGCCGTTCTC GTCGACCGAT CTTTCGGAGC GACTCGCCGA CATCGCGACC
GAGGAGGCTG TCGCGCAGGC GAGGATCGGC AGCTCCGGTG ATTTTCCAGG CCCGCTGTTT
CTCGCGGTCG CCCCGGTCGA GCTTGAGTGG CCGCAGCGTC AGGAACTCGG CCGCGGTATC
GGTGCGGATA CCGATATCGA CTATGATCAG ATGTTGCGGG TCAGCGGCGG CGGCGGGTTC
AAGCAATATC ATCGCCGCTT CCTGTTCGGC TCCGTTGCGG ATCATCTCGC CGAAACCTTC
GGCACCAAGG GCTCGCCGAT CTCGCTCTCG ACGGCCTGCG CATCGGGAGC CACCGCAATT
CAACTCGGCG TCGAAGCGAT CCGCCGTGGC GAGGCCGATG CCGCGCTGTG CGTCGCAACT
GACGGCTCGG TCAATCCCGA AGCGCTGATC CGGTTCTCGC TGCTGTCGGC GCTGTCGACC
CAGAACGACC CCCCGCAGGC CGCGGTACGA CCGTTTTCCA AGAACCGCGA CGGCTTCGTG
ATGGCCGAGG GCGCGGGCGC GCTGGTTCTC GAAAGCTATG AGGCCGCAGC CGCGCGCGGC
GCGAAAATAC TGGGCATCGT GGCGGGATGC GGCGAACTGG CGGACTCCTT CCACCGCACG
CGCTCAAGCC CCGACGGCAA GCCCATCATC GGATGCGTCC GCAACGCTCT CGCGGACGCC
GGCGTGACCG TCGAGCAGAT CGATTACATC AACGCGCACG GCACCGGCAC CCCGGAAAAC
GACAAGATGG AATATCTCGG CATCTCGACC GTGTTTGGCG AGCGCACCAG GCAGATCCCG
GTATCGTCAA ACAAATCCAT GGTCGGCCAC ACCCTCTCGG CGGCGGGAGC TGTCGAGGCG
GTGTTCTCGC TATTGACGCT CGAGCACCAG CGCATTCCGC CGACTATCAA CTATGACGTG
CCGGACCCCG CGATCCCATT CGACGTCGTT CCCAACGCAG CCCGCGATGC GCGCGTCACC
ACGGTGATGT CGAACTCGTT CGGATTCGGC GGACAGAACG CGTCGCTGAT CCTGACGCGC
GAACCGGTCT GA
 
Protein sequence
MRDKSGRPVV VVTGMGVVTS LGSGKTDNWA RLCAGESGIR TITRFPTDGL RTTMAGTIDF 
VPVEPFSSTD LSERLADIAT EEAVAQARIG SSGDFPGPLF LAVAPVELEW PQRQELGRGI
GADTDIDYDQ MLRVSGGGGF KQYHRRFLFG SVADHLAETF GTKGSPISLS TACASGATAI
QLGVEAIRRG EADAALCVAT DGSVNPEALI RFSLLSALST QNDPPQAAVR PFSKNRDGFV
MAEGAGALVL ESYEAAAARG AKILGIVAGC GELADSFHRT RSSPDGKPII GCVRNALADA
GVTVEQIDYI NAHGTGTPEN DKMEYLGIST VFGERTRQIP VSSNKSMVGH TLSAAGAVEA
VFSLLTLEHQ RIPPTINYDV PDPAIPFDVV PNAARDARVT TVMSNSFGFG GQNASLILTR
EPV