| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1501 |
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| Symbol | |
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| ID | 4032399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1705265 |
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| End bp | 1706380 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637969975 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_576783 |
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| Protein GI | 92117054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCGA ATCGATACAC ATGGATCTGG GTTGCCGCCG CGTTCGCGCT TGGCTTCAGT
GGAGCATCAT CACGGCCGGC CCATGCGGCC GAGCGGACCG TCAATTTCTA CAACTGGTCG
AACTATATCG CGCCGGGCGT GCTCGATGCC TTCACCAAGG AGACCGGCAT CAAGGTGGTC
TATGACACCT TCGATGCCAA CGAGACGCTG GAAACCCGGC TTCTCGCCGG CAAGTCGGGC
TACGACGTGG TGGTGCCCAC GGCATATTTC CTGCAGCGCC AGATCCACGC GAATATCTTC
CAGAAGCTCG ACAAGGCGAA GCTGCCGAAT CTTGCCAACG CCTGGCCGGA GGTGACGGCG
AAGCTCGCAG TCTACGATCC CGGCAACCGC TATGCCGCGA GCTACATGTG GGGCACGACC
GGCATCGGTT ACAACGTCAA GGCGGCGCAG CGCATTCTTG GATCCGACGG CAAGATCGAT
AGTTGGGATA TCATCTTCGA TCCGGACAAG CTGGCAAAGT TCAAGGACTG CGGCGTCCAG
ATGCTCGATT CCGCCGACGA TATCTTGCCG GCGGCATTGA ACTATCTGGG TCTCGATCCG
AATTCGACAG CAAAGGCCGA TCTCGAACAG GCGGCGGCCC TTGTCAGCAA GGTCAGGCCT
TCCGTTCGGA AATTTCATTC CTCGGAATAT CTGAACGGGC TCGCCACCGG CGAGATCTGT
CTTGTCGTCG GCTGGTCGGG CGATATCAAG CAGGCGCAGC GCCGCGCGGC CGAGACCCAT
AACGGCGTCG AGATCGGCTA TGCGATTCCG AAAGAGGGCG CGCAGATGTT TTTCGACAAT
CTCGCCATTC CGGCGGATGC GAAGAATGTC GCGGAAGCTT ATGAACTGAT CAATTATCTC
TATCGGCCCG ACGTGGCGGC GAAGAATTCG GATTTCCTGT CCTACGCCAA CGGCAATCTG
GCCAGCCAGA AGCTGATCGA TCCGAAAATC TTCAACGACA AAACGATCTA TCCGGACGCG
GCCACGATGA AGCGGCTGTT CGTCATCACC GCGCGCGACC CGAAGACCCA GCGTGCGGTC
AACCGGCTCT GGACCCGCGT GAAAACCGGG CGGTGA
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| Protein sequence | MIPNRYTWIW VAAAFALGFS GASSRPAHAA ERTVNFYNWS NYIAPGVLDA FTKETGIKVV
YDTFDANETL ETRLLAGKSG YDVVVPTAYF LQRQIHANIF QKLDKAKLPN LANAWPEVTA
KLAVYDPGNR YAASYMWGTT GIGYNVKAAQ RILGSDGKID SWDIIFDPDK LAKFKDCGVQ
MLDSADDILP AALNYLGLDP NSTAKADLEQ AAALVSKVRP SVRKFHSSEY LNGLATGEIC
LVVGWSGDIK QAQRRAAETH NGVEIGYAIP KEGAQMFFDN LAIPADAKNV AEAYELINYL
YRPDVAAKNS DFLSYANGNL ASQKLIDPKI FNDKTIYPDA ATMKRLFVIT ARDPKTQRAV
NRLWTRVKTG R
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