Gene Nham_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1500 
Symbol 
ID4032398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1704096 
End bp1705250 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content63% 
IMG OID637969974 
Producthypothetical protein 
Protein accessionYP_576782 
Protein GI92117053 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGG TCTTCGCCGA CCTTCCGGTC ACGATCTTCG AGACGATGTC GCAGCTCGCC 
CGCGATAACG ATGCCATCAA CCTCGGGCAG GGTTTTCCCG ACGATCCGGG TCCGGAGGAT
ATCCGGCGCG CGGCGGCGGA CGCCGTTCTC GACGGCTACA ATCAATATCC ATCGATGATG
GGAATTCCGG AGTTGCGGCG GGCGATTGCC GCGCATTACG GGCACTGGCA CGGCCTGTCG
CTCGATCCGA TGACGGAGGT CATGGTTACC TCGGGCGGCA CGGAGGCGTT GACCGGCGCC
ATACTCGCCA TGGTCGAGCC GGGTGACGAG GTCATCGTCT TCCAGCCGGT CTACGACTCC
TATCTTCCGA TCATCAGGCA GGCCGGCGGC GTTCCGCGCC TGGTCCGCCT CGAGCCGCCG
CACTGGCGGC TGACGGAAGA TGCGCTCCGC GGCGCCTTCA CCCGCAAGAC CAAGGCGGTG
CTCTTCAACA ATCCGCTCAA TCCGGCCGCG GTGGTCTATC CGCGCGAGGA TCTGGAATTG
CTGGCGCGGT TCTGCCAGGA GTTCGATGCG GTCGCGATCT GCGACGAGGT CTGGGAGCAT
GTCGTCTTCG ACGGCCGCGA GCATATTCCG CTGATCACCA TTGCCGGTAT GCGCGACCGC
ACCATCAAGA TCGGCTCGGC CGGGAAGATA TTTTCGCTGA CCGGCTGGAA GGTCGGCTTT
GTCTGCGCCG CGCCGCCGCT GCTGCGGGCG ACCGCGAAGG TGCATCAGTT TCTGACGTTC
ACGACGCCCC CCAATCTTCA GGCCGCGGTC GCCTATGGCC TCGCCAAGCC GGACGAGTTC
TTTTTTGCAA TGCGCCGCGA TCTCGCGCGA CGCCGCGACC GTCTGACCCG CGGCTTTGAA
GACATCGGGT TTCCCGTGCT GCAATCACAG GGAACCTATT TCCTGACGGT CGATCTTGCG
CCGCTCGGCC TCAATGAAAC CGACGAGGCG TTTTGCAGGC GCATCGTGAC GGACCACAAG
GTCGCGGCGA TCCCGGTTTC CGCGTTCTAC GAACAGGATG CGGTTACTTC GGTCGTGCGA
TTCTGTTTCG CCAAGAAGGA TGCCACGCTC GACAGCGCGC TGGAGCGTTT GTCCGATGCC
ATGCTTGTTG TTTAG
 
Protein sequence
MNKVFADLPV TIFETMSQLA RDNDAINLGQ GFPDDPGPED IRRAAADAVL DGYNQYPSMM 
GIPELRRAIA AHYGHWHGLS LDPMTEVMVT SGGTEALTGA ILAMVEPGDE VIVFQPVYDS
YLPIIRQAGG VPRLVRLEPP HWRLTEDALR GAFTRKTKAV LFNNPLNPAA VVYPREDLEL
LARFCQEFDA VAICDEVWEH VVFDGREHIP LITIAGMRDR TIKIGSAGKI FSLTGWKVGF
VCAAPPLLRA TAKVHQFLTF TTPPNLQAAV AYGLAKPDEF FFAMRRDLAR RRDRLTRGFE
DIGFPVLQSQ GTYFLTVDLA PLGLNETDEA FCRRIVTDHK VAAIPVSAFY EQDAVTSVVR
FCFAKKDATL DSALERLSDA MLVV