Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1493 |
Symbol | |
ID | 4030470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1696345 |
End bp | 1697091 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637969967 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_576775 |
Protein GI | 92117046 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0349217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATAG ATCGACAGAC TCTCCTATCC GTCGCGAAGT CCATTCGCTC TGGCGCAAAA TCTATCCGCG CCCAGATTTC GCCCATTCAT CCGAAGGGTT ATCCCTTCGT CGGCGGCTTC GCGCTCGCCA GCATCATCCT GTTCTGGATC TGGACCCCGC TCGGCTGGAT CGGAACGCTC TTGACGATAT GGTGCGCACT GTTTTTCCGC AATCCGGCCC GTGTGACGCC GGTTCGCGAG GGCCTCGTCG TCTCACCGGC GGACGGCCGC ATCTCGATGA TCGCGCCGGT GGTGCCGCCT GCCGAACTCG AGCTTGGCGA GCAGCCGATG GTGCGTATTT CGATCTTCAT GAGCGTGTTC AATTGCCACG TCAATCGCAG CCCGGTCGCG GGAAAGATCG AACGGATCGT CTATCGTCCC GGCAAATTCA TCAATGCCGA ACTCGACAAG GCGAGCGAGG ACAACGAGCG CAACTCGCTG GTGATATCGA CGCCGAACAA CGGTTTGGTC GGAGTGGTTC AGATCGCCGG ACTGGTCGCG CGCCGTATCG TGACGTTCGT GCATGACGGG CAGACGCTCG AAACCGGCGA ACGCTTCGGG TTGATCCGGT TCGGCTCGCG GCTCGACGTC TTCCTGCCGG AGGGGACGCA ACTACTGGTG TCCGAAGGCC AGACCGCGAT CGCCGGCGAA ACGGTGCTGG CCGATTTTCA GCAGGCTGAC GGCGGACGGA CCTATCGCAG CAATTAA
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Protein sequence | MSIDRQTLLS VAKSIRSGAK SIRAQISPIH PKGYPFVGGF ALASIILFWI WTPLGWIGTL LTIWCALFFR NPARVTPVRE GLVVSPADGR ISMIAPVVPP AELELGEQPM VRISIFMSVF NCHVNRSPVA GKIERIVYRP GKFINAELDK ASEDNERNSL VISTPNNGLV GVVQIAGLVA RRIVTFVHDG QTLETGERFG LIRFGSRLDV FLPEGTQLLV SEGQTAIAGE TVLADFQQAD GGRTYRSN
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