Gene Nham_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1493 
Symbol 
ID4030470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1696345 
End bp1697091 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID637969967 
Productphosphatidylserine decarboxylase 
Protein accessionYP_576775 
Protein GI92117046 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0349217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATAG ATCGACAGAC TCTCCTATCC GTCGCGAAGT CCATTCGCTC TGGCGCAAAA 
TCTATCCGCG CCCAGATTTC GCCCATTCAT CCGAAGGGTT ATCCCTTCGT CGGCGGCTTC
GCGCTCGCCA GCATCATCCT GTTCTGGATC TGGACCCCGC TCGGCTGGAT CGGAACGCTC
TTGACGATAT GGTGCGCACT GTTTTTCCGC AATCCGGCCC GTGTGACGCC GGTTCGCGAG
GGCCTCGTCG TCTCACCGGC GGACGGCCGC ATCTCGATGA TCGCGCCGGT GGTGCCGCCT
GCCGAACTCG AGCTTGGCGA GCAGCCGATG GTGCGTATTT CGATCTTCAT GAGCGTGTTC
AATTGCCACG TCAATCGCAG CCCGGTCGCG GGAAAGATCG AACGGATCGT CTATCGTCCC
GGCAAATTCA TCAATGCCGA ACTCGACAAG GCGAGCGAGG ACAACGAGCG CAACTCGCTG
GTGATATCGA CGCCGAACAA CGGTTTGGTC GGAGTGGTTC AGATCGCCGG ACTGGTCGCG
CGCCGTATCG TGACGTTCGT GCATGACGGG CAGACGCTCG AAACCGGCGA ACGCTTCGGG
TTGATCCGGT TCGGCTCGCG GCTCGACGTC TTCCTGCCGG AGGGGACGCA ACTACTGGTG
TCCGAAGGCC AGACCGCGAT CGCCGGCGAA ACGGTGCTGG CCGATTTTCA GCAGGCTGAC
GGCGGACGGA CCTATCGCAG CAATTAA
 
Protein sequence
MSIDRQTLLS VAKSIRSGAK SIRAQISPIH PKGYPFVGGF ALASIILFWI WTPLGWIGTL 
LTIWCALFFR NPARVTPVRE GLVVSPADGR ISMIAPVVPP AELELGEQPM VRISIFMSVF
NCHVNRSPVA GKIERIVYRP GKFINAELDK ASEDNERNSL VISTPNNGLV GVVQIAGLVA
RRIVTFVHDG QTLETGERFG LIRFGSRLDV FLPEGTQLLV SEGQTAIAGE TVLADFQQAD
GGRTYRSN