| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1490 |
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| Symbol | |
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| ID | 4030467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1691834 |
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| End bp | 1693432 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969964 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_576772 |
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| Protein GI | 92117043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGCG AACGTCTCTA TCTGTTCGAC ACCACGCTGC GCGACGGCGC TCAGACCAAC
GGCGTCGACT TCACGTTGCA GGACAAGCAG GCGATTGCGA AGATGCTGGA CGATCTCGGC
ATCGACTATG TCGAGGGCGG CTACCCCGGC GCCAATCCGA CCGATACCGA GCTGTTTTTG
CAAAAGCCCG CGCTTCGCCA TGCGCGGTTC ACCGCCTTCG GCATGACGCG GCGGCCGGGG
CGATCCGCCG CCAACGATCC GGGGTTGGCC GCACTGATCG AGGCCAAGGC GGATGCGATC
TGCTTGGTCG CAAAGTCCTC GGCCTATCAG GTCAGGGTCG CGCTTGAGAC CACGAACGAT
GAAAACCTGG CGTCGATCCG CGACAGCGTG AAGGCCGTCG CGGCTGTGGG CCGCGAGGTC
ATGGTGGACT GCGAACATTT CTTCGACGGC TACAGGGAGG ACCCCGCGTT CGCGCTGGCC
TGCGCCAGGG CGGCTTACGA CTCCGGTGCG CGGTGGGTCG TGCTGTGCGA CACCAATGGC
GGCACCATGC CGAACGAGAT CGAGGCGACG GTTCGCGAGG TCGCGAAACA CGTCCCCGGC
GACCATCTCG GCATCCACGC CCATAACGAC ACCGAGCAGG CGGTCGCCAA CTCGCTGGCC
GCGGTGCGTG CGGGCGCGCG GCAAATCCAG GGCACGTTGA ACGGCCTCGG CGAGCGCTGC
GGCAATGCCA ATCTGTGCTC GCTGATCCCG ACGCTGAAAC TGAAGAAGGA ATTCGCCGAT
GCCTTCGAGA TCGGCGTGTC CGAGGATCGC CTTGCGACCC TGATGCAGGC GTCGCGCACG
CTCGACAATA TGTTGAACCG CGCGCCGAAC CGGCGCGCTC CTTACGTCGG CGAAAGCGCG
TTCGTCACCA AGACCGGCAT TCATGCGTCG GCGATCATCA AGGACCCCGC GACCTACGAG
CACGTCGCGC CGGAATCGGT CGGCAATCGC CGCAAGGTGC TGGTGTCGGA TCAGGCCGGC
CGCTCCAACG TGCTCGCCGA GCTGGAGCGG GCGCACATTG CGTTTGACAG GAACGATCCG
AAGCTCGGAC GGCTGGTCGA GGAGATGAAG GAGCGCGAGG CGGCGGGCTA CGCCTACGAA
TCGGCCGCCG CATCGTTCGA TCTGCTGGCG CGGCGCACGC TTGGCCGCGT GCCGGAGTAT
TTCGACGTCG AGCAGTTCGA CGTCAATGTC GAACAACGCT ACAACTCCCA CGGCCAGCGC
GTCACCGTCG CGATGGCGGT CGTGAAGGTC AGGGTCGACG GCGAGATTCG GATTTCAGCC
GCCGAAGGCA ACGGTCCCGT CAATGCGCTC GATGTCGCCT TGCGCAAGGA CCTCGGCAAA
TACCAGAAGT ACATCGAGGG ACTGACGCTG ATCGATTATC GCGTGCGGAT CCTCAATGGA
GGCACCGGGG CGGTGACACG GGTGCTGATC GAGAGCGAGG ACGAGGAGGG CGAGCGCTGG
ACCACGATCG GCGTGTCGTC CAATATCATC GATGCGTCGT TCCAGGCCCT GATGGATTCA
ATATTCTACA AGCTGGTGAA GTCCGGCGCG ACGGCGTAA
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| Protein sequence | MSRERLYLFD TTLRDGAQTN GVDFTLQDKQ AIAKMLDDLG IDYVEGGYPG ANPTDTELFL
QKPALRHARF TAFGMTRRPG RSAANDPGLA ALIEAKADAI CLVAKSSAYQ VRVALETTND
ENLASIRDSV KAVAAVGREV MVDCEHFFDG YREDPAFALA CARAAYDSGA RWVVLCDTNG
GTMPNEIEAT VREVAKHVPG DHLGIHAHND TEQAVANSLA AVRAGARQIQ GTLNGLGERC
GNANLCSLIP TLKLKKEFAD AFEIGVSEDR LATLMQASRT LDNMLNRAPN RRAPYVGESA
FVTKTGIHAS AIIKDPATYE HVAPESVGNR RKVLVSDQAG RSNVLAELER AHIAFDRNDP
KLGRLVEEMK EREAAGYAYE SAAASFDLLA RRTLGRVPEY FDVEQFDVNV EQRYNSHGQR
VTVAMAVVKV RVDGEIRISA AEGNGPVNAL DVALRKDLGK YQKYIEGLTL IDYRVRILNG
GTGAVTRVLI ESEDEEGERW TTIGVSSNII DASFQALMDS IFYKLVKSGA TA
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