| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1474 |
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| Symbol | |
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| ID | 4032875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1674566 |
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| End bp | 1675654 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637969948 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_576756 |
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| Protein GI | 92117027 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.112522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC GTGATTTTTT GAAAGCTTCA GCAACCGGCG CCGCTGTCGC GGCCGTAGCC
TCGCCGGCCA TTGCACAATC GGCGCCCGAG ATCAAATGGC GCATGACCTC GAGCTTTCCG
AAGTCGCTTG ATACGATCTA TGGCGGCGCC GATTATTTCG CAAAGCAAGT TGCGGAAATG
ACCGACAACA AGTTTCAAAT TCAGCTCTTT GCTGCCGGAG AGATCGTCCC CGGATTGCAG
GCGTTCGATG CAACGGCCAA CAATACGGTC GAGATGAGCC ACACGGTGTC CTATTATTAT
GTCGGGAAGG ACCCGACGTT CGCGATCTTC GCATCTGTCC CGTTCGGCCT CAACGCGCGT
CAGCAGAATT CCTGGCTGTA TCAGGGCGGC GGCAATGAAC TCGCCAATGA GTTCTTCAAG
AAGTTCGGTG TCATCGGTTT TCCCTGCGGC AACACCGGGA CCCAGATGGG TGGCTGGTTC
CGCAAGGAGA TCAAGACGGT CGCCGACTTG TCGGGCCTGA AGATGCGAAT TGGCGGCATT
GCCGGGCAGG TGCTGCAGAA GGTTGGCGTC GTACCGCAGC AGCTTGCCGG CGGTGACATT
TATCCTTCGC TTGAAAAGGG CACGATCGAT GCGGCCGAGT GGGTCGGTCC ATACGACGAT
GAAAAGTTGG GTTTCCAGAA AGTCGCGAAG TACTACTACT ATCCCGGCTT CTGGGAAGGC
GGCCCGACGG TTCACGCGTT CTGCAATCTC GAGAAGTGGA ATACGCTGCC GAAGACCTAT
CAGGCGATCC TGACGAATGC TGCGGCCAAC GCCAACACCT GGATGGCGGC TCGCTACGAC
ATGCAGAATC CCGTAGCCCT CAAGCGGCTG GTCGCGGGTG GCACGCAATT GCGGCCGTTC
AGCAATGAAA TTCTTGATGC CTGCCTGAAA GCCACGAATG AGTTGTGGGG CGAGATTTCC
GCGACGAATC CCGACTTCAA GAAGACCATC GAAACCATGC AGGCCTATCG CTCGGACGAG
TACCTGTGGT GGCAGGTGGC CGAATATACC TACGACAGCT TCATGATCCG GTCGCGTACG
CGCGGCTGA
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| Protein sequence | MKRRDFLKAS ATGAAVAAVA SPAIAQSAPE IKWRMTSSFP KSLDTIYGGA DYFAKQVAEM
TDNKFQIQLF AAGEIVPGLQ AFDATANNTV EMSHTVSYYY VGKDPTFAIF ASVPFGLNAR
QQNSWLYQGG GNELANEFFK KFGVIGFPCG NTGTQMGGWF RKEIKTVADL SGLKMRIGGI
AGQVLQKVGV VPQQLAGGDI YPSLEKGTID AAEWVGPYDD EKLGFQKVAK YYYYPGFWEG
GPTVHAFCNL EKWNTLPKTY QAILTNAAAN ANTWMAARYD MQNPVALKRL VAGGTQLRPF
SNEILDACLK ATNELWGEIS ATNPDFKKTI ETMQAYRSDE YLWWQVAEYT YDSFMIRSRT
RG
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