Gene Nham_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1468 
Symbol 
ID4032869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1667793 
End bp1668305 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID637969942 
Producthypothetical protein 
Protein accessionYP_576750 
Protein GI92117021 
COG category[R] General function prediction only 
COG ID[COG3577] Predicted aspartyl protease 
TIGRFAM ID[TIGR02281] clan AA aspartic protease, TIGR02281 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.932196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGTA TGCTGCTCGT GATCGGAATG CTGGCGGCGA CGGCGGGAGC CGTGGTCGCC 
TATGGCGATC CCGCGCGAAT ATCGGCTGCG GGAAGCCTGG TCTCCACCAT GCTGCGCGAG
GCCGGTGCGG GGCCGCCACG TAGCGTCCAG ATTCCCCGCG CCCAGAGTGG CGATTTCAGT
TTGCACGCCA AGATCAACGG CGTGAAAACA TCGATGATCA TCGACACCGG CGCAACCTCC
GTCGTCCTCA CCTACGAAAC CGCGAAAGCG GCAGGGTTGC CGCTGGAATT GCTGAATTAC
GACGTCGATG TCGAGACCGC CGGCGGGCGT GCGCGCGCGG CGCGGCTGAC GCTCGACCGG
CTTGCGGTCG GCAAGCTCGT CGAGCGATCC GTGCCCGCGC TCGTGGTCCC GCGCGGCCAG
ATGAAAACCA ACCTGCTGGG GATGAGTTTC CTCAATCGGC TCGAGAGCTG GGAAGTCCGT
CCAGATCGAT TGATGCTGCA CGGTTATCCT TGA
 
Protein sequence
MIRMLLVIGM LAATAGAVVA YGDPARISAA GSLVSTMLRE AGAGPPRSVQ IPRAQSGDFS 
LHAKINGVKT SMIIDTGATS VVLTYETAKA AGLPLELLNY DVDVETAGGR ARAARLTLDR
LAVGKLVERS VPALVVPRGQ MKTNLLGMSF LNRLESWEVR PDRLMLHGYP