Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1465 |
Symbol | |
ID | 4032866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1660369 |
End bp | 1663635 |
Gene Length | 3267 bp |
Protein Length | 1088 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637969939 |
Product | trehalose synthase-like |
Protein accession | YP_576747 |
Protein GI | 92117018 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGA TGACCAAAAT CGATGCTGAC CGATATGTCC AGACCGACGA TCTCTGGTAC AAGGACGCCA TCATCTATCA GCTTCATGTC AAGGCCTTCG CCGACAGCAA CAACGATGGC ATCGGCGACT TCGCCGGGCT GACCAACAAG CTTGACTACC TTCAGGAACT GGGCGTTACG ACGCTGTGGC TGCTGCCGTT CTATCCGTCC CCGGGACGCG ACGATGGATA CGACATCGCC GATTACGGTT CGGTCAACCC CGACTTCGGC ACGATGAAGG ATTTCCGTCG CTTCATCTCC GAGGCGCGGC GGCGCGGCCT TCGGGTGATC ACGGAACTCG TCATCAATCA CACCTCCGAC CAGCACAGAT GGTTCAAACG CGCTCAGCGC AGCCCGCCCG GATCGAGCGC ACGCAACTGG TATGTCTGGA GCGACACCGA CAAAAAATAC CAGGACACGC GGATCATTTT CACCGACACG GAAAAATCGA ACTGGGCCTG GGATGCCGAG GCCAAGGCTT ACTACTGGCA TCGTTTCTTC ACGCATCAGC CGGACCTCAA TTTCGACAAT CCGCGCGTGG TCAGGGCGGT CATTCAGGTG ATGAAGCGAT GGCTCGACGC AGGCGTCGAC GGCTTTCGGC TGGATGCCAT TCCCTACCTC TGCGAGCGCG ACGGCACCAA CAACGAAAAT CTTCCCGAAA CCCATGCGGT GATCAAGCAC ATTCGTGCGG AGCTCGACGC CTACGCCAAG GGCAAGGTGC TTCTGGCCGA AGCCAATCAA TGGCCGGAGG ATGTCCAGTC CTATTTCGGC GATGGCGACG AGTGCCATAT GGCCTATCAT TTCCCGCTGA TGCCGCGCAT CTATATGGCG ATCGCGCAGG AGGATCGCTT TCCGATCACC GACATCTTGC GGCAGACGCC CGATATCCCG CCCAATTGCC AATGGGCGAT GTTCCTGCGC AACCATGACG AGCTGACACT CGAAATGGTG ACGGACATCG AGCGCGATTA TCTCTGGTCG ATCTATGCCG CCGATCCACG CGCACGCATC AATCTCGGCA TTCGCCGCCG CCTCGCGCCT TTGATGGACA ATGACCGGCG GAAAATCGAG CTGATGAATT CGTTGCTGAT GTCCTTTCCC GGCACCCCTA TCATCTATTA CGGCGACGAA ATCGGGATGG GCGACAACAT CTATCTCGGC GACCGCAACG GCGTCCGTAC CCCGATGCAA TGGACGCCGG ACCGCAACGG CGGCTTTTCG CGATGCGATC CCGCGCGGCT CTATGCACCT CCGGTCATGG ACGCCGTCTA CGGCTACGAG TCCGTCAATG TCGAAGCACA GTCGCGAAGC CTGTTCTCGC TGTTGAACTG GATGAAAAAG CTGATCTCGG TTCGCAAATC GAGCCACGTC TTCGGCCGTG GCACCATGTC CTTCGTGCGC TCCTCGAATC GCAGCGTTCT CGCTTACGTG CGGAAAAATA ACGACGAGGT CGTGCTCTGC GTCGCCAACC TGTCGCGATC GGCACAGGCT TCCGAACTCG ATCTGTCGCA CTGGAAAGGC CGCTCGCCGA TCGAAATGCT GGGACGAACG ACGTTTCCCG ATATCGGCGA ACTGCCTTAT CTGATCACGC TCGCGCCTTA CGGTTTCTAC TGGTTCCGCC TGACCGAAAA GCCGCCGTCG CCGAACGTTG CGGCGGTGAT CGTTCCCGAC TATGAGACCC TCGTGGTGCC GCTGGGCGCG ACCTGGATGT CACTGGCGCG GACCCGCTCG ATCTTCGAGC GCGATGTCCT GCCTTCGCAT CTCGCCCGCT CGCGCTGGTT CCCCGAGCGG TCGGCCAGCG CCATCGCCGC GCGTGTCCCG GCAGCGATAC CGCTCATGAA AGACCAGGTT TCACGGCCAT GGCTGGTGAT CTTCGACGTC ACCCATCGCG GGCAGTCGGG GCGATACGCG ATGCCGATCC GAATCCGATG GGATCGGCTC GACCGCCGCA ACTATGACGC CAAAAACATC GCCGCCGTGC GGCAGGGGTC GCGCGAGGGA ACGCTGATCG ACGCCGCCTA TGAGAACGAC CTGATCGCCG GCATCATCGA CGGTCTGCGC CACCGGACGA CCTTTGAGGA AGGCGAATTG CGGCTTGCCT ACCATCCCAC GGAACGGCTG GCCTCGATTG CAGAGGAGCC GATTGGCAAC GTGCGCGCGG TGCAGACCGA ACAATCGAAC AGCACCGCGC TGGTAGACCA GAGGTTCGTC GTCAAAATCT ATCGCAAGCT TGAAAACGGT ATCAATCCGG AAGTGGAAGT CGGGCGCTTC CTGACGGACG TCGCCGGATT CGCCAATACG CCCGCCCTGC TCGGCAGCGC CGAACTGACC GGCCCCGATG TCCAGGCCGC CGTTGCCATT GTCCATGCCT TTGTCGGCAA CCAGGGTGAC GCATGGACCG TCAGCAACGC TGCACTGGAT CGCTTTATCG ACGAGCAGCG GCTGGTCGGC GCTAGCGATT CGGCTCCGGC GCTTGAAGAG AAGGCGGCGT ATCAGCGCTC GATGAAGCAG ATCGGCAAGC GCGTCGCGGA AATGCACGTC GCGCTGGCCA GCCGCAACGA CATCGCGAAT TTCCGTCCCG AACCTGTAAC GCCTTCGGAC CTCGCGCACC TCATCGATCG TTTGATGATG CGCGCCGGGC AAACGTTCGA CCGCCTCGCT CAAGTCAAGC TTGCCGATTC GGATCGGCTT CTTGCCGATG AAATTCTGAG CATCCGTCCA ACGTTGCATG GCCGGCTCAC CGAGCTGCTG CCGCCCTCGA TTCAAATGTA CAACATTCGA CATCACGGTG ACTTTCATCT CGGGCAGATC CTCGTCGTCC GCGACGATGT CTTTATCATC GACTTTGAAG GCGAACCCCG CCGAAGCCTC CCCGAGCGGC GATTGAAAGC GCCGGCGGCC CGCGATGTCG CCGGGCTGAT CCGGTCCATC GACTATTCCG TCACCACAGC GCAAGAGCGC GTCCTCAAGA CCGGAACGGA CGACGACGGA CGACTGGCCG AGGCTTTGTC GGCATGGCGC AACGAGGCGA CGCAAACCTT CCTGACCGCC TACCGCGAAG CGATGTCCGA TCCCCGGCTA TGGCCGCAGG ATAACGACCA CGCCGACAGG ACGCTGCGGT TCTTCCTGCT CGAAAAGGCG TTCTATGAAA TCGACTACGA GCTCGCGCAT CGCCCGGACT GGCTTCGTGT CGCATTGGGC GGCGCACTTC GCGTGCTGCG CAAATAG
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Protein sequence | MNEMTKIDAD RYVQTDDLWY KDAIIYQLHV KAFADSNNDG IGDFAGLTNK LDYLQELGVT TLWLLPFYPS PGRDDGYDIA DYGSVNPDFG TMKDFRRFIS EARRRGLRVI TELVINHTSD QHRWFKRAQR SPPGSSARNW YVWSDTDKKY QDTRIIFTDT EKSNWAWDAE AKAYYWHRFF THQPDLNFDN PRVVRAVIQV MKRWLDAGVD GFRLDAIPYL CERDGTNNEN LPETHAVIKH IRAELDAYAK GKVLLAEANQ WPEDVQSYFG DGDECHMAYH FPLMPRIYMA IAQEDRFPIT DILRQTPDIP PNCQWAMFLR NHDELTLEMV TDIERDYLWS IYAADPRARI NLGIRRRLAP LMDNDRRKIE LMNSLLMSFP GTPIIYYGDE IGMGDNIYLG DRNGVRTPMQ WTPDRNGGFS RCDPARLYAP PVMDAVYGYE SVNVEAQSRS LFSLLNWMKK LISVRKSSHV FGRGTMSFVR SSNRSVLAYV RKNNDEVVLC VANLSRSAQA SELDLSHWKG RSPIEMLGRT TFPDIGELPY LITLAPYGFY WFRLTEKPPS PNVAAVIVPD YETLVVPLGA TWMSLARTRS IFERDVLPSH LARSRWFPER SASAIAARVP AAIPLMKDQV SRPWLVIFDV THRGQSGRYA MPIRIRWDRL DRRNYDAKNI AAVRQGSREG TLIDAAYEND LIAGIIDGLR HRTTFEEGEL RLAYHPTERL ASIAEEPIGN VRAVQTEQSN STALVDQRFV VKIYRKLENG INPEVEVGRF LTDVAGFANT PALLGSAELT GPDVQAAVAI VHAFVGNQGD AWTVSNAALD RFIDEQRLVG ASDSAPALEE KAAYQRSMKQ IGKRVAEMHV ALASRNDIAN FRPEPVTPSD LAHLIDRLMM RAGQTFDRLA QVKLADSDRL LADEILSIRP TLHGRLTELL PPSIQMYNIR HHGDFHLGQI LVVRDDVFII DFEGEPRRSL PERRLKAPAA RDVAGLIRSI DYSVTTAQER VLKTGTDDDG RLAEALSAWR NEATQTFLTA YREAMSDPRL WPQDNDHADR TLRFFLLEKA FYEIDYELAH RPDWLRVALG GALRVLRK
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