Gene Nham_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1465 
Symbol 
ID4032866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1660369 
End bp1663635 
Gene Length3267 bp 
Protein Length1088 aa 
Translation table11 
GC content61% 
IMG OID637969939 
Producttrehalose synthase-like 
Protein accessionYP_576747 
Protein GI92117018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA TGACCAAAAT CGATGCTGAC CGATATGTCC AGACCGACGA TCTCTGGTAC 
AAGGACGCCA TCATCTATCA GCTTCATGTC AAGGCCTTCG CCGACAGCAA CAACGATGGC
ATCGGCGACT TCGCCGGGCT GACCAACAAG CTTGACTACC TTCAGGAACT GGGCGTTACG
ACGCTGTGGC TGCTGCCGTT CTATCCGTCC CCGGGACGCG ACGATGGATA CGACATCGCC
GATTACGGTT CGGTCAACCC CGACTTCGGC ACGATGAAGG ATTTCCGTCG CTTCATCTCC
GAGGCGCGGC GGCGCGGCCT TCGGGTGATC ACGGAACTCG TCATCAATCA CACCTCCGAC
CAGCACAGAT GGTTCAAACG CGCTCAGCGC AGCCCGCCCG GATCGAGCGC ACGCAACTGG
TATGTCTGGA GCGACACCGA CAAAAAATAC CAGGACACGC GGATCATTTT CACCGACACG
GAAAAATCGA ACTGGGCCTG GGATGCCGAG GCCAAGGCTT ACTACTGGCA TCGTTTCTTC
ACGCATCAGC CGGACCTCAA TTTCGACAAT CCGCGCGTGG TCAGGGCGGT CATTCAGGTG
ATGAAGCGAT GGCTCGACGC AGGCGTCGAC GGCTTTCGGC TGGATGCCAT TCCCTACCTC
TGCGAGCGCG ACGGCACCAA CAACGAAAAT CTTCCCGAAA CCCATGCGGT GATCAAGCAC
ATTCGTGCGG AGCTCGACGC CTACGCCAAG GGCAAGGTGC TTCTGGCCGA AGCCAATCAA
TGGCCGGAGG ATGTCCAGTC CTATTTCGGC GATGGCGACG AGTGCCATAT GGCCTATCAT
TTCCCGCTGA TGCCGCGCAT CTATATGGCG ATCGCGCAGG AGGATCGCTT TCCGATCACC
GACATCTTGC GGCAGACGCC CGATATCCCG CCCAATTGCC AATGGGCGAT GTTCCTGCGC
AACCATGACG AGCTGACACT CGAAATGGTG ACGGACATCG AGCGCGATTA TCTCTGGTCG
ATCTATGCCG CCGATCCACG CGCACGCATC AATCTCGGCA TTCGCCGCCG CCTCGCGCCT
TTGATGGACA ATGACCGGCG GAAAATCGAG CTGATGAATT CGTTGCTGAT GTCCTTTCCC
GGCACCCCTA TCATCTATTA CGGCGACGAA ATCGGGATGG GCGACAACAT CTATCTCGGC
GACCGCAACG GCGTCCGTAC CCCGATGCAA TGGACGCCGG ACCGCAACGG CGGCTTTTCG
CGATGCGATC CCGCGCGGCT CTATGCACCT CCGGTCATGG ACGCCGTCTA CGGCTACGAG
TCCGTCAATG TCGAAGCACA GTCGCGAAGC CTGTTCTCGC TGTTGAACTG GATGAAAAAG
CTGATCTCGG TTCGCAAATC GAGCCACGTC TTCGGCCGTG GCACCATGTC CTTCGTGCGC
TCCTCGAATC GCAGCGTTCT CGCTTACGTG CGGAAAAATA ACGACGAGGT CGTGCTCTGC
GTCGCCAACC TGTCGCGATC GGCACAGGCT TCCGAACTCG ATCTGTCGCA CTGGAAAGGC
CGCTCGCCGA TCGAAATGCT GGGACGAACG ACGTTTCCCG ATATCGGCGA ACTGCCTTAT
CTGATCACGC TCGCGCCTTA CGGTTTCTAC TGGTTCCGCC TGACCGAAAA GCCGCCGTCG
CCGAACGTTG CGGCGGTGAT CGTTCCCGAC TATGAGACCC TCGTGGTGCC GCTGGGCGCG
ACCTGGATGT CACTGGCGCG GACCCGCTCG ATCTTCGAGC GCGATGTCCT GCCTTCGCAT
CTCGCCCGCT CGCGCTGGTT CCCCGAGCGG TCGGCCAGCG CCATCGCCGC GCGTGTCCCG
GCAGCGATAC CGCTCATGAA AGACCAGGTT TCACGGCCAT GGCTGGTGAT CTTCGACGTC
ACCCATCGCG GGCAGTCGGG GCGATACGCG ATGCCGATCC GAATCCGATG GGATCGGCTC
GACCGCCGCA ACTATGACGC CAAAAACATC GCCGCCGTGC GGCAGGGGTC GCGCGAGGGA
ACGCTGATCG ACGCCGCCTA TGAGAACGAC CTGATCGCCG GCATCATCGA CGGTCTGCGC
CACCGGACGA CCTTTGAGGA AGGCGAATTG CGGCTTGCCT ACCATCCCAC GGAACGGCTG
GCCTCGATTG CAGAGGAGCC GATTGGCAAC GTGCGCGCGG TGCAGACCGA ACAATCGAAC
AGCACCGCGC TGGTAGACCA GAGGTTCGTC GTCAAAATCT ATCGCAAGCT TGAAAACGGT
ATCAATCCGG AAGTGGAAGT CGGGCGCTTC CTGACGGACG TCGCCGGATT CGCCAATACG
CCCGCCCTGC TCGGCAGCGC CGAACTGACC GGCCCCGATG TCCAGGCCGC CGTTGCCATT
GTCCATGCCT TTGTCGGCAA CCAGGGTGAC GCATGGACCG TCAGCAACGC TGCACTGGAT
CGCTTTATCG ACGAGCAGCG GCTGGTCGGC GCTAGCGATT CGGCTCCGGC GCTTGAAGAG
AAGGCGGCGT ATCAGCGCTC GATGAAGCAG ATCGGCAAGC GCGTCGCGGA AATGCACGTC
GCGCTGGCCA GCCGCAACGA CATCGCGAAT TTCCGTCCCG AACCTGTAAC GCCTTCGGAC
CTCGCGCACC TCATCGATCG TTTGATGATG CGCGCCGGGC AAACGTTCGA CCGCCTCGCT
CAAGTCAAGC TTGCCGATTC GGATCGGCTT CTTGCCGATG AAATTCTGAG CATCCGTCCA
ACGTTGCATG GCCGGCTCAC CGAGCTGCTG CCGCCCTCGA TTCAAATGTA CAACATTCGA
CATCACGGTG ACTTTCATCT CGGGCAGATC CTCGTCGTCC GCGACGATGT CTTTATCATC
GACTTTGAAG GCGAACCCCG CCGAAGCCTC CCCGAGCGGC GATTGAAAGC GCCGGCGGCC
CGCGATGTCG CCGGGCTGAT CCGGTCCATC GACTATTCCG TCACCACAGC GCAAGAGCGC
GTCCTCAAGA CCGGAACGGA CGACGACGGA CGACTGGCCG AGGCTTTGTC GGCATGGCGC
AACGAGGCGA CGCAAACCTT CCTGACCGCC TACCGCGAAG CGATGTCCGA TCCCCGGCTA
TGGCCGCAGG ATAACGACCA CGCCGACAGG ACGCTGCGGT TCTTCCTGCT CGAAAAGGCG
TTCTATGAAA TCGACTACGA GCTCGCGCAT CGCCCGGACT GGCTTCGTGT CGCATTGGGC
GGCGCACTTC GCGTGCTGCG CAAATAG
 
Protein sequence
MNEMTKIDAD RYVQTDDLWY KDAIIYQLHV KAFADSNNDG IGDFAGLTNK LDYLQELGVT 
TLWLLPFYPS PGRDDGYDIA DYGSVNPDFG TMKDFRRFIS EARRRGLRVI TELVINHTSD
QHRWFKRAQR SPPGSSARNW YVWSDTDKKY QDTRIIFTDT EKSNWAWDAE AKAYYWHRFF
THQPDLNFDN PRVVRAVIQV MKRWLDAGVD GFRLDAIPYL CERDGTNNEN LPETHAVIKH
IRAELDAYAK GKVLLAEANQ WPEDVQSYFG DGDECHMAYH FPLMPRIYMA IAQEDRFPIT
DILRQTPDIP PNCQWAMFLR NHDELTLEMV TDIERDYLWS IYAADPRARI NLGIRRRLAP
LMDNDRRKIE LMNSLLMSFP GTPIIYYGDE IGMGDNIYLG DRNGVRTPMQ WTPDRNGGFS
RCDPARLYAP PVMDAVYGYE SVNVEAQSRS LFSLLNWMKK LISVRKSSHV FGRGTMSFVR
SSNRSVLAYV RKNNDEVVLC VANLSRSAQA SELDLSHWKG RSPIEMLGRT TFPDIGELPY
LITLAPYGFY WFRLTEKPPS PNVAAVIVPD YETLVVPLGA TWMSLARTRS IFERDVLPSH
LARSRWFPER SASAIAARVP AAIPLMKDQV SRPWLVIFDV THRGQSGRYA MPIRIRWDRL
DRRNYDAKNI AAVRQGSREG TLIDAAYEND LIAGIIDGLR HRTTFEEGEL RLAYHPTERL
ASIAEEPIGN VRAVQTEQSN STALVDQRFV VKIYRKLENG INPEVEVGRF LTDVAGFANT
PALLGSAELT GPDVQAAVAI VHAFVGNQGD AWTVSNAALD RFIDEQRLVG ASDSAPALEE
KAAYQRSMKQ IGKRVAEMHV ALASRNDIAN FRPEPVTPSD LAHLIDRLMM RAGQTFDRLA
QVKLADSDRL LADEILSIRP TLHGRLTELL PPSIQMYNIR HHGDFHLGQI LVVRDDVFII
DFEGEPRRSL PERRLKAPAA RDVAGLIRSI DYSVTTAQER VLKTGTDDDG RLAEALSAWR
NEATQTFLTA YREAMSDPRL WPQDNDHADR TLRFFLLEKA FYEIDYELAH RPDWLRVALG
GALRVLRK