Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1464 |
Symbol | |
ID | 4032865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1658203 |
End bp | 1660353 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637969938 |
Product | glycogen branching enzyme |
Protein accession | YP_576746 |
Protein GI | 92117017 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAC TGTCCTCCGA AGCCCGCGCC ATCGTCGAAG GGCGGCATTC AGACCCCTTT CACTATCTCG GCCGTCATCG CGAGAATGAC CGTCAGGTGG TTCGCGCCTA TCTGCCCGAG GCATCCGATG TGCGCGTCGT CGATGAGCAC GGTGGAGAGA CGACGCTGAC ACGCATTCAT GACGCCGGGC TTTTCCTCGG CGACCTGCCG AACGGCGCCA AGCGCTACCG CCTTCGCGCT CGCTTTGGCG CCGACACGGT CGAGCTTGAG GACCCTTACC GCTTTCCGCC GATCCTCAGC GATTTCGATC TCTATCTGCT CGGTGAAGGC ACGGATCAAC GGCTCTATGA CAAGCTCGGC GCTCACCCGA TAACGATGGA TGGCGTGGGC GGCACCGGCT TCGTCGTGCT TGCGCCCAAC GCACGGGCCG TCGCTGTCGT CGGCGATTTC AATTGCTGGG ATCGCCGCCG TCATCCGATG CGCGTGCGAG GCAACGGATA TTGGGAATTG TTCATTCCCG GCGCGCAAAC GGGCGACCGC TACAAATTCG CGATCACAGA TAAGAGCGGT AGTTTGTTGC CGCTGAAGTC CGATCCGATG GCGTTCGCGG CGGAAGTTCG ACCGAACACG GCGTCGATCG TAGTCGATGA AGCAGCGCTG CCGTGCCCCA CACCAGCGGC CGCCACGATC AATGCACGCC GTGCGCCGAT CTCCATCTAC GAGGTCCATC TCGGATCGTG GCGGCGCGGC GACGACAACC GCTGGCTGTC CTATCGCGAA CTCGCGGACA CCCTGCCGCG CTATGCCAGC AGCCTTGGCT TCACCCATAT CGAGCTGATG CCGGTGAACG AGCATCCGTT CGACGGTTCG TGGGGCTATC AGCCCACCGG CCTTTACGCA CCGACGAGCC GCTTTGGTTC GCCCGACGAT TTCGCGCATC TGGTCGATGC CTGCCATCGC GAAGGACTCG GCGTCCTGCT CGATTGGGTG CCCGGCCACT TTCCCGACGA TCCTCACGGA CTCGGCCATT TCGACGGCAC CGCGTTTTAC GAACACGCCA ACCCGTTGCA GGGCCGCCAC CTTGACTGGG ACACCCTGAT CTACAACTAC GGCCGCACCG AAGTGGTCAA TTTCCTCGTC GCCAACGCGC TGTTCTGGCT CGATCGCTAC GGCCTGGACG GCCTTCGCGT CGATGCTGTC GCGTCCATGC TCTATCTCGA TTACAGCCGT GCCGAAGGCG GCTGGATTCC CAACAAACAC GGCGGCCGGG AAAATCTTGA AGCCATCGCA TTTCTGCGCC GATTCAACAG GGAGGTGTTC GCCAAATTCC CGCACGCCAC CACGATAGCG GAGGAATCGA CGGCATGGCC GCAGGTCTCG CGTCCGATTG AGTTCGGCGG CCTCGGATTC GGCTACAAAT GGAATATGGG CTGGATGCAC GATACGCTGG ACTATATCGG CAAGGATCCG ATCTACCGCA AGCATCACCA CGGCCAGATC CTGTTCGGGC TGCACTATGC ATTCTCGGAA AATTTCATCC TGCCGCTATC GCATGACGAG GTGGTGCACG AGAAGCGCTC GATCCTCGGC CGTATGCCGG GCGATGACTG GCAGCGGTTC GCAAACCTGC GCGCCTACTA CGCGTTCATG TTCGGCCATC CCGGCAAGAA GCTGATGTTC ATGGGTGCGG AGTTCGGCCA GGAGCGCGAA TGGAACCACG ACCACGCACT TGACTGGCAT CTTCTCGATC AGGCACGACA CCAGGGAGTC CAGGCCGTCG TTCGCGATCT CAACGCGCTC TATCGTGACG TTCCGGCACT GCACGAACTG GATTGCGATC CGGCCGGATT CGAATGGATC ATGGCCAACG ATGCCGATCG CAGCGTCTTC GCCTGGATGC GCAAAGGCGA AAGCGGACGG GCGCGCTGTC TGGTGATCGC CAATTTCACG CCGACCGTCC ATCGCAGCTA CCGCGTGCGC GTACCCTTCG CCGGCAAGTG GCGCGAGGCG CTCAATACCG ACTCCGCGCA TTATGGCGGA AGCAATGTCG GGAACAACGG AGTGGTCGAG ACGCTGGACG GTGTCATCCC CGAGCTTAGT CTGACGCTTC CGCCGCTCGC GGTGATCTTT CTGGTACCGG AACGCGCATG A
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Protein sequence | MIELSSEARA IVEGRHSDPF HYLGRHREND RQVVRAYLPE ASDVRVVDEH GGETTLTRIH DAGLFLGDLP NGAKRYRLRA RFGADTVELE DPYRFPPILS DFDLYLLGEG TDQRLYDKLG AHPITMDGVG GTGFVVLAPN ARAVAVVGDF NCWDRRRHPM RVRGNGYWEL FIPGAQTGDR YKFAITDKSG SLLPLKSDPM AFAAEVRPNT ASIVVDEAAL PCPTPAAATI NARRAPISIY EVHLGSWRRG DDNRWLSYRE LADTLPRYAS SLGFTHIELM PVNEHPFDGS WGYQPTGLYA PTSRFGSPDD FAHLVDACHR EGLGVLLDWV PGHFPDDPHG LGHFDGTAFY EHANPLQGRH LDWDTLIYNY GRTEVVNFLV ANALFWLDRY GLDGLRVDAV ASMLYLDYSR AEGGWIPNKH GGRENLEAIA FLRRFNREVF AKFPHATTIA EESTAWPQVS RPIEFGGLGF GYKWNMGWMH DTLDYIGKDP IYRKHHHGQI LFGLHYAFSE NFILPLSHDE VVHEKRSILG RMPGDDWQRF ANLRAYYAFM FGHPGKKLMF MGAEFGQERE WNHDHALDWH LLDQARHQGV QAVVRDLNAL YRDVPALHEL DCDPAGFEWI MANDADRSVF AWMRKGESGR ARCLVIANFT PTVHRSYRVR VPFAGKWREA LNTDSAHYGG SNVGNNGVVE TLDGVIPELS LTLPPLAVIF LVPERA
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