| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1463 |
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| Symbol | |
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| ID | 4032864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1656128 |
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| End bp | 1658206 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637969937 |
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| Product | glycogen debranching protein GlgX |
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| Protein accession | YP_576745 |
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| Protein GI | 92117016 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGGA TCTCGGAAGG CACAGGTGTC CGCCTCGGTT CGAACTGGGA TGGGCGCGGA
ACGAATTTTG CGCTTTTTTC AGCCCATGCG GAAAAGGTCG AGCTCTGCCT GTTCGACAGT
CAGGGGCGAC GGGAAATCGA ACGCGTCGCG CTGCCAGAAC ACAATGAAGA CGTCTGGCAC
GGCTATCTCA ACGACGTTTC GCCCGGTCAA CTCTACGGCT ATCGCGTCTA TGGCCCCTAC
GATCCGCAGC ACGGTCACCG GTTCAACCCC CACAAGCTGC TGCTCGACCC TTACGCGAAG
AAAATCAGCG GACGGCTGGT CTGGAGCGAT GCGCATTTCG CTTACCGCGC CGGAAGCCCG
CGCGAGGATC TGTCCTTCGA CCGGCGCGAC AACGCCCGCG CCATGCCGAA AGCCACCGTC
ATCGACGAAA CGTTCAACTG GGGCCGTCGC GAACCGCGGC CCAGCATTCC CTGGGAAGAT
ACGATCATCT ATGAAGCTCA CGTCAAAGGC CTGAGCAAGA CGCGTCGGGA TATTTCTCCT
GAACTGCGCG GGACCTACCG CGCGCTCGCG GCGCCCGCCA TGATCGATCA CCTGCGACGG
CTCGGCGTCA CCACCATCGA GCTTCTACCG ATTCATGGCT TCATCGACGA TCGTCAACTG
GTCGAGCGCA AGCTGAGCAA CTATTGGGGA TACAATTCAA TCTCGTTTTT CGCACCGGAG
CAGCGCTACG CCAAGGATGC CGCGCTGGAC GAATTCCGTA CGTCGGTTGC CCGCCTTCAC
GACGCCGGCT TCGAGGTCAT ACTCGACGTC GTTTACAATC ACACCGCCGA AGGCAATCAC
CTCGGGCCGA CGCTGTCGTT CCGCGGCATC GACAACGCAT CCTACTATTG GTTGATGCCG
GATGACCCAC GCTTCTACGA CGACTTCACA GGTACCGGCA ACTCGCTGAA CCTGACTCAC
CCCCGCGTGC TGCAAATGGT CATGGACTCG CTACGCTATT GGGTCGAAGT CTGCCACATC
GACGGCTTCC GCTTCGACCT CGCCAGCACG CTGGCGCGCG GCCCTCATGG ATTCGACCGC
AACAGCTCTT TTTTCAATGC AATCCGGCAG GATCCCGCCC TCGCCGCCGT CAAGCTTGTC
GCCGAGCCCT GGGATGTCGG CCCCGGCGGC TATCAGGTCG GCGGCTTTCC TTCGCAATGG
TCGGAGTGGA ACGACCGATA TCGCAGCACG CTGCGCCGCT ACTGGGCCGG CGAAGGACAT
CTGATCGGCG ATGTCGGCGG CCGCATGACC GGATCGTCCG ATCTCTTCAA CCGTGACGAC
CGCGCGCCGC GCGCCGGCAT CAATCACGTC ACCGTCCACG ACGGCTTTAC GCTGGCCGAT
CTGTTTTCCT ACAACGAGAA ACACAACGAG GCCAATGGCG AGGACAATCG CGACGGCTCC
AATGACAATC TCAGCAATAA TTGCGGCCAC GAAGGACCGA CGGACGACCC TGCGATCGTT
GCGCTTCGCC GCCAGCTTCG CAAAAATCAA CTCGCCTGCC TGATGCTCGC CCAAGGGGTT
CCGCTTCTCC TTGCGGGCGA TGAAGTCGGC AACAGCCAGC ATGGAAACAA CAACGCCTAT
TGCCAGGACA ACGAGATCGG GTGGATCGAC TGGAGCGGCC TTGGCCATGA GGGCGACGAC
ATGACCGGCT TTGTCGGACG CCTTACCGCC ATCCGAAGAC GCTTTGCGCA GATCAGGGCG
CGACAATGGG TGGTCGGCAA GAAGACAGAC GGCTCCTATG GCGTGCTGTG GCTGACGCCG
CACGGCAACG AAATGACCGA GGCCGACTGG AATTTTCCGG AAGGACGGTT TCTCTCCTAC
GTGCTCGGCC CGATGGAGCA CGGCCGGCAG GCGCTCTACG TCGTCCTCAA CGCGGTGCCG
GAGCCGGTCG AATTCAGGCT TCCAGGCATG GAAGAGTACA AGACATGGTC GATCGTGCTT
CATACCACGG ACGATGATGC CGAAGGCAGC GTGCACGGCC CCAACGCAAC GATGCAGGCG
CCGCCTCGCA GCGTGATCGC GTTCGCAGGC CAGCCATGA
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| Protein sequence | MMRISEGTGV RLGSNWDGRG TNFALFSAHA EKVELCLFDS QGRREIERVA LPEHNEDVWH
GYLNDVSPGQ LYGYRVYGPY DPQHGHRFNP HKLLLDPYAK KISGRLVWSD AHFAYRAGSP
REDLSFDRRD NARAMPKATV IDETFNWGRR EPRPSIPWED TIIYEAHVKG LSKTRRDISP
ELRGTYRALA APAMIDHLRR LGVTTIELLP IHGFIDDRQL VERKLSNYWG YNSISFFAPE
QRYAKDAALD EFRTSVARLH DAGFEVILDV VYNHTAEGNH LGPTLSFRGI DNASYYWLMP
DDPRFYDDFT GTGNSLNLTH PRVLQMVMDS LRYWVEVCHI DGFRFDLAST LARGPHGFDR
NSSFFNAIRQ DPALAAVKLV AEPWDVGPGG YQVGGFPSQW SEWNDRYRST LRRYWAGEGH
LIGDVGGRMT GSSDLFNRDD RAPRAGINHV TVHDGFTLAD LFSYNEKHNE ANGEDNRDGS
NDNLSNNCGH EGPTDDPAIV ALRRQLRKNQ LACLMLAQGV PLLLAGDEVG NSQHGNNNAY
CQDNEIGWID WSGLGHEGDD MTGFVGRLTA IRRRFAQIRA RQWVVGKKTD GSYGVLWLTP
HGNEMTEADW NFPEGRFLSY VLGPMEHGRQ ALYVVLNAVP EPVEFRLPGM EEYKTWSIVL
HTTDDDAEGS VHGPNATMQA PPRSVIAFAG QP
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