Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1462 |
Symbol | |
ID | 4032863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1654368 |
End bp | 1656131 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637969936 |
Product | malto-oligosyltrehalose trehalohydrolase |
Protein accession | YP_576744 |
Protein GI | 92117015 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCCG GCCGCTTCGG CCCCCTTCTC AGGCCGGACG GCGTAACGTT CCGGCTTTGG GCGCCCGGCG CGCGCGAGGT TTCCGTCATC ACCGACACCG CGCACACGAT GGAAAAAGGC AGCGGCGGCT GGTTCATTGC CGAGGTGGCC GCGACCCGGC CCGGTTCACG CTATCACTAT CGGATCGACG ACGAACTGGA CGTACCGGAT CCGGCGTCGT CCTATCAACC CGACGACGTG TCCGGTCCAA GCGAACTTGT CGACCACAAT CAATTCCGGT GGAAGGCGAT CGACTGGCGC GGGCGGCCGT GGCACGAGAC GGTCATCCTC GAATGTCATG TCGGCACGTT TACGCCGGAA GGCACCTATC GGGCCATGAT CGGCAAGCTC GATCATCTGA TTTCGACCGG AATCACCGCT CTCGAATTGA TGCCGCTCGC CGACTTCGCG GGGACGCGGA ATTGGGGTTA TGACGGCGCG TTGTGGTACG CGCCCGATCA CGTTTACGGC ACGCCGGACG ATCTCAGGGA GTTGATCGAT CAAGCCCATC TGCGCGGACT GATGGTCTTT CTCGATGTCG TCTATAACCA CTTCGGGCCG GAGGGAAATT ATCTCGGGCG CTACGCACCG CAGTTTTTCT GCGATGCGCA GACCCCATGG GGAGCAGCGA TCGACTATCG CATTCCGGAA GTCCGCGCCT TCGCAGTCGA CAATGCACTG CACTGGCTCG GTAACTATCG CTTCGACGGC CTTCGCCTCG ACGCGGTGCA TGCCCTCGCC GAGGTTGGCG AGCCGTCGAT CCTGAACGAT ATCAGCCACG CCGTCGGGGT TCTGGCGCGG CAAAGCGGAC GGCATATCCA CCTTGTGCTG GAGAACGACG ACAACCGCGC GGTGTTGCTG GATCCGTCTT CCGACATTCC CGACGGAAAG TATCGCGCCC AGTGGAATGA CGACTACCAT CACGTCTGGC ATGTCATCCT CACCCAGGAG ACCCACGGCT ACTACGGCGA CTACGCCACG CAGCCGCGTC GTCTGCTCGT GCGAACGCTG CGCGATGGCT TTGCCTATCA GGGCGAACCC TCGGCCTATC GCGGCGGGCG CGCTCGCGGG GAACCGATCG GCGCACTCCC GCCCGCCGCC TTCGTGAACT TCCTTCAGAA TCACGACCAG ATCGGCAACC GCGCGCTGGG CGATCGCCTC GAATGGACCG CCGACGCGCG GGCTATCGAG GCCGCACTCG CAATCACCCT GCTCGCACCG ATGCCGCCCT TGATGTTCAT GGGCGAGGAA TGGGGAGCGA CCACGCCCTT TCCATTTTTC TGCGACTTCA AACGCGACCT CGCCGATGCG GTGCGAGCCG GTCGGCGCAG GGAATACGCC GCGGCCTATG AGGCGTACGG GGACGATGTG CCCGATCCCC TTGCGCAGTC GACATTCGAG TCGGCGGCTC TCGCGTGGCC CGAGGAGGGT CAAAACCTGC CGCGCCATGC GCTCGTCAAG GAACTGTTGC GTATCCGCCG GGACGAACTC ACGCCGCATC TTGGCAACGC CGCGTTCGCC TCGGCCGAGC TGCGTCAAAA CGATCGCCTG CTGATCGCTT ACTGGCGCCT TGGCAACAGC GCACTGTTGC ATCTTCGCGC CAACATCTCG GATCACAACG TCACCAACGA TGCAGCTTCG CTGCCAGGCC GCCCGATCTG GGGCGGAGAG CCGCCGGCGC GCTTGCCGGC GTGGTCGGTC TTCTGGTCCA TGGGAGCGAT CTGA
|
Protein sequence | MSAGRFGPLL RPDGVTFRLW APGAREVSVI TDTAHTMEKG SGGWFIAEVA ATRPGSRYHY RIDDELDVPD PASSYQPDDV SGPSELVDHN QFRWKAIDWR GRPWHETVIL ECHVGTFTPE GTYRAMIGKL DHLISTGITA LELMPLADFA GTRNWGYDGA LWYAPDHVYG TPDDLRELID QAHLRGLMVF LDVVYNHFGP EGNYLGRYAP QFFCDAQTPW GAAIDYRIPE VRAFAVDNAL HWLGNYRFDG LRLDAVHALA EVGEPSILND ISHAVGVLAR QSGRHIHLVL ENDDNRAVLL DPSSDIPDGK YRAQWNDDYH HVWHVILTQE THGYYGDYAT QPRRLLVRTL RDGFAYQGEP SAYRGGRARG EPIGALPPAA FVNFLQNHDQ IGNRALGDRL EWTADARAIE AALAITLLAP MPPLMFMGEE WGATTPFPFF CDFKRDLADA VRAGRRREYA AAYEAYGDDV PDPLAQSTFE SAALAWPEEG QNLPRHALVK ELLRIRRDEL TPHLGNAAFA SAELRQNDRL LIAYWRLGNS ALLHLRANIS DHNVTNDAAS LPGRPIWGGE PPARLPAWSV FWSMGAI
|
| |