Gene Nham_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1462 
Symbol 
ID4032863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1654368 
End bp1656131 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content64% 
IMG OID637969936 
Productmalto-oligosyltrehalose trehalohydrolase 
Protein accessionYP_576744 
Protein GI92117015 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR02402] malto-oligosyltrehalose trehalohydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG GCCGCTTCGG CCCCCTTCTC AGGCCGGACG GCGTAACGTT CCGGCTTTGG 
GCGCCCGGCG CGCGCGAGGT TTCCGTCATC ACCGACACCG CGCACACGAT GGAAAAAGGC
AGCGGCGGCT GGTTCATTGC CGAGGTGGCC GCGACCCGGC CCGGTTCACG CTATCACTAT
CGGATCGACG ACGAACTGGA CGTACCGGAT CCGGCGTCGT CCTATCAACC CGACGACGTG
TCCGGTCCAA GCGAACTTGT CGACCACAAT CAATTCCGGT GGAAGGCGAT CGACTGGCGC
GGGCGGCCGT GGCACGAGAC GGTCATCCTC GAATGTCATG TCGGCACGTT TACGCCGGAA
GGCACCTATC GGGCCATGAT CGGCAAGCTC GATCATCTGA TTTCGACCGG AATCACCGCT
CTCGAATTGA TGCCGCTCGC CGACTTCGCG GGGACGCGGA ATTGGGGTTA TGACGGCGCG
TTGTGGTACG CGCCCGATCA CGTTTACGGC ACGCCGGACG ATCTCAGGGA GTTGATCGAT
CAAGCCCATC TGCGCGGACT GATGGTCTTT CTCGATGTCG TCTATAACCA CTTCGGGCCG
GAGGGAAATT ATCTCGGGCG CTACGCACCG CAGTTTTTCT GCGATGCGCA GACCCCATGG
GGAGCAGCGA TCGACTATCG CATTCCGGAA GTCCGCGCCT TCGCAGTCGA CAATGCACTG
CACTGGCTCG GTAACTATCG CTTCGACGGC CTTCGCCTCG ACGCGGTGCA TGCCCTCGCC
GAGGTTGGCG AGCCGTCGAT CCTGAACGAT ATCAGCCACG CCGTCGGGGT TCTGGCGCGG
CAAAGCGGAC GGCATATCCA CCTTGTGCTG GAGAACGACG ACAACCGCGC GGTGTTGCTG
GATCCGTCTT CCGACATTCC CGACGGAAAG TATCGCGCCC AGTGGAATGA CGACTACCAT
CACGTCTGGC ATGTCATCCT CACCCAGGAG ACCCACGGCT ACTACGGCGA CTACGCCACG
CAGCCGCGTC GTCTGCTCGT GCGAACGCTG CGCGATGGCT TTGCCTATCA GGGCGAACCC
TCGGCCTATC GCGGCGGGCG CGCTCGCGGG GAACCGATCG GCGCACTCCC GCCCGCCGCC
TTCGTGAACT TCCTTCAGAA TCACGACCAG ATCGGCAACC GCGCGCTGGG CGATCGCCTC
GAATGGACCG CCGACGCGCG GGCTATCGAG GCCGCACTCG CAATCACCCT GCTCGCACCG
ATGCCGCCCT TGATGTTCAT GGGCGAGGAA TGGGGAGCGA CCACGCCCTT TCCATTTTTC
TGCGACTTCA AACGCGACCT CGCCGATGCG GTGCGAGCCG GTCGGCGCAG GGAATACGCC
GCGGCCTATG AGGCGTACGG GGACGATGTG CCCGATCCCC TTGCGCAGTC GACATTCGAG
TCGGCGGCTC TCGCGTGGCC CGAGGAGGGT CAAAACCTGC CGCGCCATGC GCTCGTCAAG
GAACTGTTGC GTATCCGCCG GGACGAACTC ACGCCGCATC TTGGCAACGC CGCGTTCGCC
TCGGCCGAGC TGCGTCAAAA CGATCGCCTG CTGATCGCTT ACTGGCGCCT TGGCAACAGC
GCACTGTTGC ATCTTCGCGC CAACATCTCG GATCACAACG TCACCAACGA TGCAGCTTCG
CTGCCAGGCC GCCCGATCTG GGGCGGAGAG CCGCCGGCGC GCTTGCCGGC GTGGTCGGTC
TTCTGGTCCA TGGGAGCGAT CTGA
 
Protein sequence
MSAGRFGPLL RPDGVTFRLW APGAREVSVI TDTAHTMEKG SGGWFIAEVA ATRPGSRYHY 
RIDDELDVPD PASSYQPDDV SGPSELVDHN QFRWKAIDWR GRPWHETVIL ECHVGTFTPE
GTYRAMIGKL DHLISTGITA LELMPLADFA GTRNWGYDGA LWYAPDHVYG TPDDLRELID
QAHLRGLMVF LDVVYNHFGP EGNYLGRYAP QFFCDAQTPW GAAIDYRIPE VRAFAVDNAL
HWLGNYRFDG LRLDAVHALA EVGEPSILND ISHAVGVLAR QSGRHIHLVL ENDDNRAVLL
DPSSDIPDGK YRAQWNDDYH HVWHVILTQE THGYYGDYAT QPRRLLVRTL RDGFAYQGEP
SAYRGGRARG EPIGALPPAA FVNFLQNHDQ IGNRALGDRL EWTADARAIE AALAITLLAP
MPPLMFMGEE WGATTPFPFF CDFKRDLADA VRAGRRREYA AAYEAYGDDV PDPLAQSTFE
SAALAWPEEG QNLPRHALVK ELLRIRRDEL TPHLGNAAFA SAELRQNDRL LIAYWRLGNS
ALLHLRANIS DHNVTNDAAS LPGRPIWGGE PPARLPAWSV FWSMGAI