| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1460 |
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| Symbol | |
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| ID | 4032861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1648930 |
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| End bp | 1651425 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637969934 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_576742 |
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| Protein GI | 92117013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.228639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTTTG AATCTCCTCC CAAGCAGGAT CGCATCCTTG AAGATGACGC ACCGATCCGG
CCCGAATCCG GAGACGACGA CATCGTCGCG GAGATCAAGA GCGCGATACT GTCCAAAATC
GTTCTGGCGG CAGGAAAGGA TGTCAAGCGC GCCAATATCC ACGACTGGTA TATCGCGGCG
GCGCTGACGC TGCGCGACCG CATCGTCTAT CAATGGCTTC AATCCGATCG TGCCGCTCAG
AGGCGTGGCG ACAAGCGCGT CTATTATCTG TCCCTTGAAT TCCTGATCGG ACGTCTGCTG
ACCGACGCCC TCACCAACAT GTCGCTGATG GGGCCGTTCC GCACGGCGGT CGAGGATCTC
GGAATTGATT TCGACGCGTT GCGCGACGCC GAACCGGATG CCGCGCTCGG CAACGGAGGC
CTGGGCCGGC TCGCCGCGTG TTTCATGGAA AGCATGGCGA CGCTGGCGAT TCCGGCGCGA
GGCTATGGCA TTCGCTATGA ACACGGACTG TTTCGTCAGA TCGTTTCCGA CGGATGGCAG
GAAGAGTTTC CCGAACAGTG GCTGCTCTCC GGTAACCCCT GGGAATTCGA ACGCGGCGAC
GTGGTGTTCG ATATCCAGTA TGGTGGACAT CTCGACCGCA TCGAGCAGAC CGATAAACCA
TCCCGGACGC TCTGGATACC GGATGAGACC ATTCAAGCGG TTGCCTACGA CACGCCGATC
GTCGGCTGGC GCGGCCATCA CGTCAACGCG CTGCGGCTGT GGTCCGCACG CGCGGTCGAT
CCGATGCGCC TCGACACCTT CAACAACGGC GATCACCTCG GCGCGATGTC GGAGATGGCG
CGGGCGGAAG CGATTTCGAA ATTTCTCTAT CCAAGCGACG AAACGCCGGC CGGCCGCGCA
TTGCGCCTGC GTCAGGAGTA CTTTTTCGTC TCCGCCTCGT TGCAGGACAT CCTCGATCGC
CATCTGCACA GCGACGGCGA CATCAGATCG CTGCCGTCCC ATGCCGCGAT CCAGCTCAAC
GATACCCACC CCAGCCTTGC CGTTCCCGAA CTGATGCGGC TGCTGGTGGA TAAATATCAG
ATCGGCTGGG ACGATGCCTG GGACATCACC ACCAGGACAA TCTCCTATAC CAATCACACG
CTGTTGCCGG AGGCACTCGA GACCTGGCAG GTCGAACTGT TCGAGCGGAT GCTGCCGCGC
CATCTCGACA TCATTTACCG GATCAACGTC GACCATCTTG CCGCGGCGGA AAAACATTTT
GGAGCGGACG CCCGTTCGCG GGCATCGGTG TCGCTGATCG ACGAAACAGG CGGCCGCCGC
GTCCGCATGG GGCATCTCGC CTTCGTTGGT TCCCACCGCA TTAATGGTGT CTCCGCCATG
CATAGCGAGC TGATGCGCGA AACCGTGTTC GCCGATCTGA ACAGCCTTTA TCCGGGCCGC
ATCACCAACA AGACCAACGG CATTACCTTC CGGCGCTGGC TACATCAATG CAATCCGGAA
CTCACCTCAC TGCTGCAGGA TGCATGTGGC GCTGCGGTTC TCGACGAGCC CGAGCGGTTG
CGGATGCTGG AGCCATTGTC GGATGATCGC GCGTTCCAGC AGCGCTTCCA GGCGGTCAAG
CGGGCAAACA AGATTGCGCT CGCACAGACC ATAGCCAGCC AGCTCGGCAT TGTCGTCGAC
CCATCGGCAC TGTTCGATGT CCAGATCAAG CGCATCCATG AATACAAGCG CCAGCTTCTC
AACGCGATCG AGGCGGTTGC GCTCTATCAG GCCATCCTTG CGAATCCGGA AGGCAACTGG
ACACCGCGCA TCAAGATTTT CGCCGGAAAA GCCGCGGCGA GCTACCGGCA GGCCAAGCTC
ATCATCAAGT TCATCAACGA CATCGGCAAC GTGATCAACA ACGATCCCGC GATCAGGGAC
CTCCTCAAGG TCGTTTTCAT TCCGAACTAT AATGTCAGCG CCGCTGAAAT CATCGTCCCG
GCGAGCGACC TGTCCGAACA GATTTCCACC GCCGGCATGG AAGCCTCAGG AACCGGCAAC
ATGAAGCTCG CGCTGAACGG CGCAATCACG ATCGGAACGC TCGATGGCGC CAACATCGAA
ATTCTCGAGC ATGTCGGCGA GGAAAATATC TTCATCTTCG GCATGAAAGC GGATGAGGTT
GTCCAGCGCC GCGCCATGGG ACTGGATGCC ACCGGCATCA TCTCGTCATC GCCGATGCTG
ACTGGTGTGA TCGAGGCCAT CGAACGCGGC GTGTTCTCGC CCGACGACCC TTCGCGTTTC
GCACCCATCG CCCACGCGCT GCGTTTTCTC GATCACTATC TGGTATCGGC CGATTTCGAG
GATTATTACC GCGCGCAACG CGCCGTCGAC ATGAAGTGGC ATAGTCCGGA GTGGGCGCGT
TCAAGCATTC TCAACGTCGC GCGCATGGCG TGGTTCTCGT CCGACCGCAC CATCCGCGAA
TACGCCGAGG ACATCTGGAA TATTCCCCTG ACCTGA
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| Protein sequence | MVFESPPKQD RILEDDAPIR PESGDDDIVA EIKSAILSKI VLAAGKDVKR ANIHDWYIAA
ALTLRDRIVY QWLQSDRAAQ RRGDKRVYYL SLEFLIGRLL TDALTNMSLM GPFRTAVEDL
GIDFDALRDA EPDAALGNGG LGRLAACFME SMATLAIPAR GYGIRYEHGL FRQIVSDGWQ
EEFPEQWLLS GNPWEFERGD VVFDIQYGGH LDRIEQTDKP SRTLWIPDET IQAVAYDTPI
VGWRGHHVNA LRLWSARAVD PMRLDTFNNG DHLGAMSEMA RAEAISKFLY PSDETPAGRA
LRLRQEYFFV SASLQDILDR HLHSDGDIRS LPSHAAIQLN DTHPSLAVPE LMRLLVDKYQ
IGWDDAWDIT TRTISYTNHT LLPEALETWQ VELFERMLPR HLDIIYRINV DHLAAAEKHF
GADARSRASV SLIDETGGRR VRMGHLAFVG SHRINGVSAM HSELMRETVF ADLNSLYPGR
ITNKTNGITF RRWLHQCNPE LTSLLQDACG AAVLDEPERL RMLEPLSDDR AFQQRFQAVK
RANKIALAQT IASQLGIVVD PSALFDVQIK RIHEYKRQLL NAIEAVALYQ AILANPEGNW
TPRIKIFAGK AAASYRQAKL IIKFINDIGN VINNDPAIRD LLKVVFIPNY NVSAAEIIVP
ASDLSEQIST AGMEASGTGN MKLALNGAIT IGTLDGANIE ILEHVGEENI FIFGMKADEV
VQRRAMGLDA TGIISSSPML TGVIEAIERG VFSPDDPSRF APIAHALRFL DHYLVSADFE
DYYRAQRAVD MKWHSPEWAR SSILNVARMA WFSSDRTIRE YAEDIWNIPL T
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