| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1441 |
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| Symbol | |
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| ID | 4032842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1624754 |
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| End bp | 1626325 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969915 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_576723 |
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| Protein GI | 92116994 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACA GGCCCACTGA TCTCTCGCCG CCTTCTCCGC CCAAGCCCGC CCGCCGTTCC
GGGCTCACCG CGCGCAAGTT CGCGCTGATG GCGTCGGTCG CCGCCGGCCT CGGCCTGGCC
GCATACGGGT TCAGTCCCCC GACGGACAAA GCCGATCTCT TCACCACCCC GGCCCATGCG
CAGGTTAATA ACGACGTCAG CAAGGTCGCG CAGCCGATCG GCTTTGCCGA TATCGTCGAG
CGTGTGAAGC CGTCGGTGAT TTCGGTCAAG GTCCGTATGA AGGACAAGGT GGTCGCCGGC
GACGACGATT CGCCGTTCCA GCCGGGTTCG CCGATGGAAC GCTTCTTCCG TCGCTTTGGC
GGACCGGATG GTCTGCCGCC GGGAATGCAT GGCCGGCGTG GCCATGGCAT CGTGACGGGA
CAGGGCTCCG GCTTCTTCAT TTCGGCCGAT GGCTACGCCG TAACCAACAA CCACGTCGTC
GACGACGCCG ACAAGGTCGA AGTCACGACC GATGGCGGCA AGACCTACAC CGCCAAGGTG
ATCGGAACCG ATCCGCGCAC CGACATTGCC CTGATCAAGG TCGAGGGCGG CTCGAATTTC
CCGTTTGCGA AGCTATCGGA CGACAAGGCG CGGATCGGCG ACTGGGTGCT CGCGGTCGGC
AACCCGTTCG GCCTCGGCGG CACCGTGACC TCCGGCATCG TGTCGGCCAT CGGCCGCGAC
ATCGGCAACG GTCCCTATGA CGATTTCATC CAGATCGACG CGCCCGTCAA CAAGGGTAAC
TCCGGCGGTC CGGCCTTCAA CATGAAGGGC GACGTGATCG GCGTGAACAC CGCGATCTAT
TCGCCGTCCG GCGGCAGCGT CGGCATCGCA TTTTCGATTC CCGCCAACAC CGTGAAGAAC
GTCGTCGCGC AACTCAAGGA CAAGGGGTCG GTGAGCCGCG GATGGATCGG CGTCCAGATC
CAGCCGGTCA CCGCTGACAT CGCCGATAGC CTCGGCCTCA AGAAAACCGA AGGCGCGCTG
GTGGCCGAGC CGCAGGCCGA CAGCCCGGCG GCCAAGGCCG GCATCCAGTC CGGCGACGTG
ATCACGCAAG TCAACGGTGC TACCGTCAAG GATGCGCGCG AACTGGCGCG GACCATCGGT
GGCCTTGCGC CGGGGACCTC GATCAAGCTG AACGTCCTGC ACAAGGGGAC GGACAAGGTC
ATCAACCTGA CGCTCGGCAT CCTGCCGAAC ACCGCGGAAG CAAAGGCCGA TCTATACGGC
GATGATCACG GGCCGTCGCA TGGCGACGAC GTTCCCAGGC TTGGCATGAC GGTTGCTCCG
GCGGGGTCGG TTGCCGGCGC CGGCACGGAG GGCGTGGTCG TCGTCGATGT CGATCCGAAG
AGCGCGGCCG CGGATCGCGG CTTCAAGGAA GGCGACGTGA TCCTCGAGGT CGGAGGAAAG
GACGTCTCCA ATTCGGCCGA CGTGCGCGAG GCGATCAAAG CGGCGCGCGC GGACCACAAG
AACAGTATTT TGATGCGGGT TCGCACCGGC GGCACGGCGC GTTTCGTCGC GGTTCCGATC
GCGAAGGGCT AG
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| Protein sequence | MTDRPTDLSP PSPPKPARRS GLTARKFALM ASVAAGLGLA AYGFSPPTDK ADLFTTPAHA
QVNNDVSKVA QPIGFADIVE RVKPSVISVK VRMKDKVVAG DDDSPFQPGS PMERFFRRFG
GPDGLPPGMH GRRGHGIVTG QGSGFFISAD GYAVTNNHVV DDADKVEVTT DGGKTYTAKV
IGTDPRTDIA LIKVEGGSNF PFAKLSDDKA RIGDWVLAVG NPFGLGGTVT SGIVSAIGRD
IGNGPYDDFI QIDAPVNKGN SGGPAFNMKG DVIGVNTAIY SPSGGSVGIA FSIPANTVKN
VVAQLKDKGS VSRGWIGVQI QPVTADIADS LGLKKTEGAL VAEPQADSPA AKAGIQSGDV
ITQVNGATVK DARELARTIG GLAPGTSIKL NVLHKGTDKV INLTLGILPN TAEAKADLYG
DDHGPSHGDD VPRLGMTVAP AGSVAGAGTE GVVVVDVDPK SAAADRGFKE GDVILEVGGK
DVSNSADVRE AIKAARADHK NSILMRVRTG GTARFVAVPI AKG
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