Gene Nham_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1438 
Symbol 
ID4033298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1621284 
End bp1621772 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID637969912 
Productcytochrome c-type biogenesis protein CcmE 
Protein accessionYP_576720 
Protein GI92116991 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2332] Cytochrome c-type biogenesis protein CcmE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCA AGCAGCGGCG TTTGACGATG ATCGGCGGAT CGCTCGTGGT GCTCGCAATC 
GCAGCCGCGC TGGTGCTGAA CGCATTGCGC GACTCCATCG TGTTTTTCTC GACGCCGGTG
ATGGTGTCGG AACATCACAT TCAACCGGGC CAGCGCTTCC GGCTGGGCGG GCTGGTGCAG
AATGGCTCGT TGGTCCGCGG CGACAATCTC GTGGTCACAT TCAAAGTGTC CGACGGAAGT
GCGACGCTCC CGGTTACCTA CAAGGGCATC CTGCCGGATC TGTTCCGCGA GGGGCAGGGC
GTGGTCGCCG AGGGCGCGCT CGACAGTTCG GGCGTGTTCC GGGCCGACAC CGTGCTGGCC
AAGCATGACG AGACCTACAT GCCGAAGGAG GTCGCGGATG CCCTGAAGAA ACAGGGCCAC
TGGAAGGATG ACTACGGACC GCAAGCCGGG GCTGTCGAAG CGTCGGGCAA GCAGGGGGTG
TCGCAATGA
 
Protein sequence
MTRKQRRLTM IGGSLVVLAI AAALVLNALR DSIVFFSTPV MVSEHHIQPG QRFRLGGLVQ 
NGSLVRGDNL VVTFKVSDGS ATLPVTYKGI LPDLFREGQG VVAEGALDSS GVFRADTVLA
KHDETYMPKE VADALKKQGH WKDDYGPQAG AVEASGKQGV SQ