Gene Nham_1429 details

Gene Information

• Locus tag: Nham_1429
• ID: 4033289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1613937
• End bp: 1614599
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637969903
• Product: putative glycohydrolase
• Protein accession: YP_576711
• Protein GI: 92116982
• COG category: [R] General function prediction only
• COG ID: [COG3179] Predicted chitinase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAACG TAGCCCCGGC CGCGCGCGCT CCCGCTATGC CTGATTTCCA GGCGGTGCTG 
CGGCGGCTCT GGCCGCGCGG CGACAGCAGG ATCGCCGGGC TGATCGAGGG CATGGCGGCG 
ACGGCGCCCG CCGTGTTCGA CAAATATGGA ATCGCCACGC CGCTGTTGAT TGCGCACGTC 
ATGGCCCAGA TCAGCCACGA ATGCGGGGCC GGGACCGCTG TGATCGAGAA CCTGAACTAT 
TCGGCGGCCC GCATGACGCA GGTGTGGCCG TCGCGCTTTT CGACCACCGC CAGCGCCACT 
CCTTACGCGC ACAATCCGCG CGCGCTCGCC AACAAGGTCT ACAACGGCCG CATGGGCAAT 
CGCCCCGGCT CCGACGACGG CTGGAATTTC CGCGGCCGCG GCGCCGTTCA AACGACGGGA 
CGCGACGGTT ATCGGCGGCT GGCAGCGGCA ACCGGCCTCG ATGTCGTCGC CTATCCGGAT 
CTCGTCAACG ATCCCCGTCA TTTTCTCGAA TGCGGCGTGG CCGATTTCGT CAACTGCGGA 
TGCCTTCCGT TCGCTCGGAA AGACGACGTG CGCGGCGTCA CGAAGCGGCT GAACGGCGGG 
TTCGTCGGGC TGCCGCAACG CAAGTCGTGG CTTTCGAAAT GGAAAGCCGC GCTGACGATC 
TGA 

 

Protein sequence

MPNVAPAARA PAMPDFQAVL RRLWPRGDSR IAGLIEGMAA TAPAVFDKYG IATPLLIAHV 
MAQISHECGA GTAVIENLNY SAARMTQVWP SRFSTTASAT PYAHNPRALA NKVYNGRMGN 
RPGSDDGWNF RGRGAVQTTG RDGYRRLAAA TGLDVVAYPD LVNDPRHFLE CGVADFVNCG 
CLPFARKDDV RGVTKRLNGG FVGLPQRKSW LSKWKAALTI