Gene Nham_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1426 
Symbol 
ID4033286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1606553 
End bp1610407 
Gene Length3855 bp 
Protein Length1284 aa 
Translation table11 
GC content68% 
IMG OID637969900 
Productgene transfer agent (GTA) orfg15, like protein 
Protein accessionYP_576708 
Protein GI92116979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGC TGGTTCTTTC CGTCGCGGGC GGCGCGGCTG GTGCGTTGTT CGGTCCGGCC 
GGCGCGATCG CAGGCCGCAT CGCCGGCGCG CTGGTCGGCA ACGTCGTCGA CCGCAAGCTG
TTCGGACCCG GCAATCAGAA TGTGGTCGGG CCTCGGCTCG CCGATCTCGA CGTGATGGCT
TCGACCGAAG GCGCGCCGAT TCCGCGTGTC TACGGCCGCG CGCGGCTGTC CGGTCAGGTG
ATCTGGGCGA CGCAGCTCGA AGAGGTCGTC AGCAGCGAAA CCTCGTCGTC CGGCGGCAAG
GGCGGCCTGT CCAGCGGACC GAGCACGACG ACCACCACCT ACAGTTATTT CGCCAACTTC
GCGGTCGGCC TTTGCGAAGG CGTGATCGGA CGGGTGGGGC GGATCTGGGC CGACGGCAGT
CCGCTGGATC TCTCCGGCCT GACGCTTCGC GTTCATCGCG GCACCGAGGA TCAGGCCCCG
GACGATCTGA TCGTCGCAAA AGAAGGCGCC GGCAACGCGC CGGCCTATCG CGGACTTGCC
TACATCGTGT TCGAGCGGCT GCCGCTGGCG AAGTTCGGCA ATCGTATTCC GCAGCTTTCG
TTCGAGATCA TCCGCCCCAT AGGGAAGCTC GAACGGATGG TGCGCGCGGT GACGCTGATC
CCCGGCACCA CCGAATTCGG CTACGAGCCA TCCGCTGTCG TGCAGTCGCT CGGCCCCGGT
CAGTCGGCGC CGGAAAACCG TCACGTGCCG AACGCCGAAT CTGACGTGAT CGCGGCGCTC
GATGATCTTC AGGGCGTGTG TCCGAATCTT GAGCGCGTGG CTGTGGTCGT TGCGTGGTTC
GGCTCCGATC TGCGCGCCGG AAGCTGTCTC GTTCGTCCCG GCGCCGACAG CGCCAGCAAG
GTCACGCGCG GCAGCAACTG GTCGGTGGCC GGCGTGACGC GGGGGAGCGC CTATGTGGTG
TCGCAGGTCG ACGGCCGACC GGCCTTCGGC GGCACGCCGT CCGACGACAG CGTGAGGCAC
CTGATTGCGG AGCTGAAGGC GCGCGGTCTC AAGGTCACGT TCTATCCCTT CATCATGATG
GATATTCCAG CCGGAAACGG CCTGAGCGAT CCGTGGAGCG GGGCATCGTC GCAGCCGCCA
TATCCATGGC GCGGCCGCAT CACCTGCGAT CCCGCGCCGG GGCGGGCGGG CTCGCCGCAA
GGCACGGCGG CGGCGGCGAC GCAGGTTGGC AGCTTTTTCT CCGGCGGAAG CTGGAACTAT
CGCGGCATGA TCCTGCACTA TGCGAGCTTG GTCGCCTCGG CCGGGGGCGT CGATGCCTTC
ATGATCGGAT CGGAGTTGCG GTCGCTGACG CGCGTGCGCT CCGGCTCCGG CGTCTATCCT
GCCGTCGATG CGCTGGTGAC GCTCGCGGCT GAAGTGAAAG CCATCGTCGG CTCCTCGACG
ATCGTGACCT ATGGCGCGGA CTGGACCGAG TACGGCGCCG ATGTCGTCGA TGCCGGCGCT
TCAGAAGTGC GCTTTCCGCT CGATCCGCTG TGGGCGTCCG GCGCGATCGA TGCCGTCGGC
ATCGACTACT ATGCGCCGCT CGCGGACTGG CGCGACGAGG CCGGACATCT CGATGCGAGC
ATTGCGGCTT CGACCTATGA CGTCGGCTAT CTCGCGGATA ACATTTACGG CGGCGAGGGG
TTCGACTGGT ACTACACCGA TGACGCCGCG CGCGCCGCGC AAAACCGCAC GCCGATCACC
GACGGCCTCG GCAAGCCGTG GACCTTCCGC GTCAAGGACA TCAAGGCGTG GTGGTCGTCG
GCGCATTACG AGCGCGTCGG TGGCGTCGAA CTCGCAAGCC CGACCGCGTG GGTGCCGCAA
GGCAAGCCAG TGTGGCTGAC CGAGGTCGGC TGTCCGGCGG TGGACAAGGG CGCCAACCAG
CCGAGCGTGT TTCCCGATCC GAAATCGTCG GAGAACCACT TGCCGTATTT CTCCAGCGGC
AGCCGCGACG ACCTGATACA GCGCCGCTAT CTGCAAGCCT TTCTCGGCAA ACTGGATCCC
TCGTTCGGCG CGGCGGATGC CGATAATCCC GTCTCGCCAG TCTATGGCCG GCGCATGATC
GAGCCGTCCG CGATCCATCT GTGGACCTGG GACGCGCGGC CCTATCCGGC GTTTCCCGCC
GCGACCGATG TCTGGAGCGA CGGGCCGAAC TGGCGGACCG GGCACTGGCT CACCGGCCGT
CTCGGCACTG CGCCGATGGA CGCGCTGGTG CAGGCGCTGC TCGCCGATTG CGGCGTCACC
GGTGCCGACA CCTCGGCGCT GCGCGAGAGC TGCGACGGCT ACGTGATCGA CCGGCCGATG
TCGCCGCGCG CCATGATAGA ACCGCTCGCC GGCGCCTACG CCTTCGATGC GACCGCCGCC
GACGGAACGC TGCGCTTCGT TTCGCGCGGC GGCGTGCCGG TCGCCGAATT CGCCGAGGAC
GACCTGGTGC TGCCGGACGA TGGCGCGCCG GCGCGGCTGA CGCGCGCGCA GGAAACCGAA
CTGCCGCGCG AAGCCGGTTT CGGCTTTACC GACGGCACGG TGGATTACCG ACGCTCTGCG
GTGACGTCGC GCCGGCTGGC GGGTGGATCG AACCGGAGCG TTCACTCCGC TCTCGCGGTC
GTCAGCGACG ACGCCGCGAT GTCGCGGCGG GCCGAGGTCT GGCTGCAGGA CCTGTGGGCG
GGCCGCGAAA GCGCCGCGTT TTCGCTCGGG CCGCAATGCC TGTCGCTGAC GCCGGGCGAC
GTGATCGCGG TGACGATCAA CGGGCGGCGG CGGCTGTTCG AGATCGACGC CACGGTCGAT
GCCGAAGCGC GGCAGGTGAC GGCGCGCAGC ATCGATCCCG AGGTGTTTTC GGTGCCGCTG
TCGACGCCAC GGCAAACGCG GCCGGCGATA CCGGCGGCGC TCGGGCCGGT TCAGGCGGCG
GTGCTCGATT TGCCGACCAT CGACTCTTCG CAGCCGCCGA TCCTGACCCG GCTCGCTGTC
TTCGCCAGTC CGTGGCCGAT ATCGGTGACG GTCTGGACTT CGCCGGACGG CGCGAGTTTT
CAGCCGGCCG CGATCGCCCC AGTGCCCGCG ACATCAGGCG AAACGCTCGA CCCGCTGCCG
GCGGGTCCGG CCGGGCGATG GGATCGCGGC AACACCGTCC GCGTCCGCCT CTACGGCGGC
GCGCTGACGT CGGTATGCGA TGCCCGCGTG CTCGGGGGCG CCAACGCGGC GGCGGTGCGG
ACCACTGACG GGGAGTGGGA AATCCTGCAG TTTGCCAATG CGGAGCTGGT GGACGGCGGC
ACCTATAGGC TATCGCGCCT GTTGCGCGGG CAGGCCGGCA GCGAATACGC GATCGCCGAT
GTGTTGCCGG CGGGCGCGCC GTTCGTGCTG CTCGATACGC ATCTTGTGCC GCTGTCGCGC
GGACTGAATG CGCTGGGTCG TCCGATCCTG GTGCGGCTTG CCGCCGCCGG ACGAAACCAT
GACGATCCGA CCGCCGTTGC GCTGACGGTG ACGCCGCGTC CGACCGCGCT GCTGCCGCTG
TCGCCGGTGC ACGTCAAGGC GTTGCGCGAG AGCGGCGGCG TTCGCATCTC GTGGATTCGC
CGGACCCGCA TCGACGGCGA CGGCTGGGGC GTCGAGGTGC CTCTCGGTGA AGATAGCGAG
GCCTACACGC TCGACGTCTT CTCCGGTGGC ACGATCGTGC GCAGCATCGC GTGCAGCACA
CCGGAAGCGT TCTACGCCGA TGCCGACGAA CTGGCGGATT TCGGCACGCC GCAGGGCAGC
CTGCACCTTC GCGTCGCGCA GGTCTCCGCA ACCGTCGGCG CCGGTCATCC CACTGAGCTT
ACTCTTACCC TCTGA
 
Protein sequence
MAALVLSVAG GAAGALFGPA GAIAGRIAGA LVGNVVDRKL FGPGNQNVVG PRLADLDVMA 
STEGAPIPRV YGRARLSGQV IWATQLEEVV SSETSSSGGK GGLSSGPSTT TTTYSYFANF
AVGLCEGVIG RVGRIWADGS PLDLSGLTLR VHRGTEDQAP DDLIVAKEGA GNAPAYRGLA
YIVFERLPLA KFGNRIPQLS FEIIRPIGKL ERMVRAVTLI PGTTEFGYEP SAVVQSLGPG
QSAPENRHVP NAESDVIAAL DDLQGVCPNL ERVAVVVAWF GSDLRAGSCL VRPGADSASK
VTRGSNWSVA GVTRGSAYVV SQVDGRPAFG GTPSDDSVRH LIAELKARGL KVTFYPFIMM
DIPAGNGLSD PWSGASSQPP YPWRGRITCD PAPGRAGSPQ GTAAAATQVG SFFSGGSWNY
RGMILHYASL VASAGGVDAF MIGSELRSLT RVRSGSGVYP AVDALVTLAA EVKAIVGSST
IVTYGADWTE YGADVVDAGA SEVRFPLDPL WASGAIDAVG IDYYAPLADW RDEAGHLDAS
IAASTYDVGY LADNIYGGEG FDWYYTDDAA RAAQNRTPIT DGLGKPWTFR VKDIKAWWSS
AHYERVGGVE LASPTAWVPQ GKPVWLTEVG CPAVDKGANQ PSVFPDPKSS ENHLPYFSSG
SRDDLIQRRY LQAFLGKLDP SFGAADADNP VSPVYGRRMI EPSAIHLWTW DARPYPAFPA
ATDVWSDGPN WRTGHWLTGR LGTAPMDALV QALLADCGVT GADTSALRES CDGYVIDRPM
SPRAMIEPLA GAYAFDATAA DGTLRFVSRG GVPVAEFAED DLVLPDDGAP ARLTRAQETE
LPREAGFGFT DGTVDYRRSA VTSRRLAGGS NRSVHSALAV VSDDAAMSRR AEVWLQDLWA
GRESAAFSLG PQCLSLTPGD VIAVTINGRR RLFEIDATVD AEARQVTARS IDPEVFSVPL
STPRQTRPAI PAALGPVQAA VLDLPTIDSS QPPILTRLAV FASPWPISVT VWTSPDGASF
QPAAIAPVPA TSGETLDPLP AGPAGRWDRG NTVRVRLYGG ALTSVCDARV LGGANAAAVR
TTDGEWEILQ FANAELVDGG TYRLSRLLRG QAGSEYAIAD VLPAGAPFVL LDTHLVPLSR
GLNALGRPIL VRLAAAGRNH DDPTAVALTV TPRPTALLPL SPVHVKALRE SGGVRISWIR
RTRIDGDGWG VEVPLGEDSE AYTLDVFSGG TIVRSIACST PEAFYADADE LADFGTPQGS
LHLRVAQVSA TVGAGHPTEL TLTL