Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1426 |
Symbol | |
ID | 4033286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1606553 |
End bp | 1610407 |
Gene Length | 3855 bp |
Protein Length | 1284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637969900 |
Product | gene transfer agent (GTA) orfg15, like protein |
Protein accession | YP_576708 |
Protein GI | 92116979 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCGC TGGTTCTTTC CGTCGCGGGC GGCGCGGCTG GTGCGTTGTT CGGTCCGGCC GGCGCGATCG CAGGCCGCAT CGCCGGCGCG CTGGTCGGCA ACGTCGTCGA CCGCAAGCTG TTCGGACCCG GCAATCAGAA TGTGGTCGGG CCTCGGCTCG CCGATCTCGA CGTGATGGCT TCGACCGAAG GCGCGCCGAT TCCGCGTGTC TACGGCCGCG CGCGGCTGTC CGGTCAGGTG ATCTGGGCGA CGCAGCTCGA AGAGGTCGTC AGCAGCGAAA CCTCGTCGTC CGGCGGCAAG GGCGGCCTGT CCAGCGGACC GAGCACGACG ACCACCACCT ACAGTTATTT CGCCAACTTC GCGGTCGGCC TTTGCGAAGG CGTGATCGGA CGGGTGGGGC GGATCTGGGC CGACGGCAGT CCGCTGGATC TCTCCGGCCT GACGCTTCGC GTTCATCGCG GCACCGAGGA TCAGGCCCCG GACGATCTGA TCGTCGCAAA AGAAGGCGCC GGCAACGCGC CGGCCTATCG CGGACTTGCC TACATCGTGT TCGAGCGGCT GCCGCTGGCG AAGTTCGGCA ATCGTATTCC GCAGCTTTCG TTCGAGATCA TCCGCCCCAT AGGGAAGCTC GAACGGATGG TGCGCGCGGT GACGCTGATC CCCGGCACCA CCGAATTCGG CTACGAGCCA TCCGCTGTCG TGCAGTCGCT CGGCCCCGGT CAGTCGGCGC CGGAAAACCG TCACGTGCCG AACGCCGAAT CTGACGTGAT CGCGGCGCTC GATGATCTTC AGGGCGTGTG TCCGAATCTT GAGCGCGTGG CTGTGGTCGT TGCGTGGTTC GGCTCCGATC TGCGCGCCGG AAGCTGTCTC GTTCGTCCCG GCGCCGACAG CGCCAGCAAG GTCACGCGCG GCAGCAACTG GTCGGTGGCC GGCGTGACGC GGGGGAGCGC CTATGTGGTG TCGCAGGTCG ACGGCCGACC GGCCTTCGGC GGCACGCCGT CCGACGACAG CGTGAGGCAC CTGATTGCGG AGCTGAAGGC GCGCGGTCTC AAGGTCACGT TCTATCCCTT CATCATGATG GATATTCCAG CCGGAAACGG CCTGAGCGAT CCGTGGAGCG GGGCATCGTC GCAGCCGCCA TATCCATGGC GCGGCCGCAT CACCTGCGAT CCCGCGCCGG GGCGGGCGGG CTCGCCGCAA GGCACGGCGG CGGCGGCGAC GCAGGTTGGC AGCTTTTTCT CCGGCGGAAG CTGGAACTAT CGCGGCATGA TCCTGCACTA TGCGAGCTTG GTCGCCTCGG CCGGGGGCGT CGATGCCTTC ATGATCGGAT CGGAGTTGCG GTCGCTGACG CGCGTGCGCT CCGGCTCCGG CGTCTATCCT GCCGTCGATG CGCTGGTGAC GCTCGCGGCT GAAGTGAAAG CCATCGTCGG CTCCTCGACG ATCGTGACCT ATGGCGCGGA CTGGACCGAG TACGGCGCCG ATGTCGTCGA TGCCGGCGCT TCAGAAGTGC GCTTTCCGCT CGATCCGCTG TGGGCGTCCG GCGCGATCGA TGCCGTCGGC ATCGACTACT ATGCGCCGCT CGCGGACTGG CGCGACGAGG CCGGACATCT CGATGCGAGC ATTGCGGCTT CGACCTATGA CGTCGGCTAT CTCGCGGATA ACATTTACGG CGGCGAGGGG TTCGACTGGT ACTACACCGA TGACGCCGCG CGCGCCGCGC AAAACCGCAC GCCGATCACC GACGGCCTCG GCAAGCCGTG GACCTTCCGC GTCAAGGACA TCAAGGCGTG GTGGTCGTCG GCGCATTACG AGCGCGTCGG TGGCGTCGAA CTCGCAAGCC CGACCGCGTG GGTGCCGCAA GGCAAGCCAG TGTGGCTGAC CGAGGTCGGC TGTCCGGCGG TGGACAAGGG CGCCAACCAG CCGAGCGTGT TTCCCGATCC GAAATCGTCG GAGAACCACT TGCCGTATTT CTCCAGCGGC AGCCGCGACG ACCTGATACA GCGCCGCTAT CTGCAAGCCT TTCTCGGCAA ACTGGATCCC TCGTTCGGCG CGGCGGATGC CGATAATCCC GTCTCGCCAG TCTATGGCCG GCGCATGATC GAGCCGTCCG CGATCCATCT GTGGACCTGG GACGCGCGGC CCTATCCGGC GTTTCCCGCC GCGACCGATG TCTGGAGCGA CGGGCCGAAC TGGCGGACCG GGCACTGGCT CACCGGCCGT CTCGGCACTG CGCCGATGGA CGCGCTGGTG CAGGCGCTGC TCGCCGATTG CGGCGTCACC GGTGCCGACA CCTCGGCGCT GCGCGAGAGC TGCGACGGCT ACGTGATCGA CCGGCCGATG TCGCCGCGCG CCATGATAGA ACCGCTCGCC GGCGCCTACG CCTTCGATGC GACCGCCGCC GACGGAACGC TGCGCTTCGT TTCGCGCGGC GGCGTGCCGG TCGCCGAATT CGCCGAGGAC GACCTGGTGC TGCCGGACGA TGGCGCGCCG GCGCGGCTGA CGCGCGCGCA GGAAACCGAA CTGCCGCGCG AAGCCGGTTT CGGCTTTACC GACGGCACGG TGGATTACCG ACGCTCTGCG GTGACGTCGC GCCGGCTGGC GGGTGGATCG AACCGGAGCG TTCACTCCGC TCTCGCGGTC GTCAGCGACG ACGCCGCGAT GTCGCGGCGG GCCGAGGTCT GGCTGCAGGA CCTGTGGGCG GGCCGCGAAA GCGCCGCGTT TTCGCTCGGG CCGCAATGCC TGTCGCTGAC GCCGGGCGAC GTGATCGCGG TGACGATCAA CGGGCGGCGG CGGCTGTTCG AGATCGACGC CACGGTCGAT GCCGAAGCGC GGCAGGTGAC GGCGCGCAGC ATCGATCCCG AGGTGTTTTC GGTGCCGCTG TCGACGCCAC GGCAAACGCG GCCGGCGATA CCGGCGGCGC TCGGGCCGGT TCAGGCGGCG GTGCTCGATT TGCCGACCAT CGACTCTTCG CAGCCGCCGA TCCTGACCCG GCTCGCTGTC TTCGCCAGTC CGTGGCCGAT ATCGGTGACG GTCTGGACTT CGCCGGACGG CGCGAGTTTT CAGCCGGCCG CGATCGCCCC AGTGCCCGCG ACATCAGGCG AAACGCTCGA CCCGCTGCCG GCGGGTCCGG CCGGGCGATG GGATCGCGGC AACACCGTCC GCGTCCGCCT CTACGGCGGC GCGCTGACGT CGGTATGCGA TGCCCGCGTG CTCGGGGGCG CCAACGCGGC GGCGGTGCGG ACCACTGACG GGGAGTGGGA AATCCTGCAG TTTGCCAATG CGGAGCTGGT GGACGGCGGC ACCTATAGGC TATCGCGCCT GTTGCGCGGG CAGGCCGGCA GCGAATACGC GATCGCCGAT GTGTTGCCGG CGGGCGCGCC GTTCGTGCTG CTCGATACGC ATCTTGTGCC GCTGTCGCGC GGACTGAATG CGCTGGGTCG TCCGATCCTG GTGCGGCTTG CCGCCGCCGG ACGAAACCAT GACGATCCGA CCGCCGTTGC GCTGACGGTG ACGCCGCGTC CGACCGCGCT GCTGCCGCTG TCGCCGGTGC ACGTCAAGGC GTTGCGCGAG AGCGGCGGCG TTCGCATCTC GTGGATTCGC CGGACCCGCA TCGACGGCGA CGGCTGGGGC GTCGAGGTGC CTCTCGGTGA AGATAGCGAG GCCTACACGC TCGACGTCTT CTCCGGTGGC ACGATCGTGC GCAGCATCGC GTGCAGCACA CCGGAAGCGT TCTACGCCGA TGCCGACGAA CTGGCGGATT TCGGCACGCC GCAGGGCAGC CTGCACCTTC GCGTCGCGCA GGTCTCCGCA ACCGTCGGCG CCGGTCATCC CACTGAGCTT ACTCTTACCC TCTGA
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Protein sequence | MAALVLSVAG GAAGALFGPA GAIAGRIAGA LVGNVVDRKL FGPGNQNVVG PRLADLDVMA STEGAPIPRV YGRARLSGQV IWATQLEEVV SSETSSSGGK GGLSSGPSTT TTTYSYFANF AVGLCEGVIG RVGRIWADGS PLDLSGLTLR VHRGTEDQAP DDLIVAKEGA GNAPAYRGLA YIVFERLPLA KFGNRIPQLS FEIIRPIGKL ERMVRAVTLI PGTTEFGYEP SAVVQSLGPG QSAPENRHVP NAESDVIAAL DDLQGVCPNL ERVAVVVAWF GSDLRAGSCL VRPGADSASK VTRGSNWSVA GVTRGSAYVV SQVDGRPAFG GTPSDDSVRH LIAELKARGL KVTFYPFIMM DIPAGNGLSD PWSGASSQPP YPWRGRITCD PAPGRAGSPQ GTAAAATQVG SFFSGGSWNY RGMILHYASL VASAGGVDAF MIGSELRSLT RVRSGSGVYP AVDALVTLAA EVKAIVGSST IVTYGADWTE YGADVVDAGA SEVRFPLDPL WASGAIDAVG IDYYAPLADW RDEAGHLDAS IAASTYDVGY LADNIYGGEG FDWYYTDDAA RAAQNRTPIT DGLGKPWTFR VKDIKAWWSS AHYERVGGVE LASPTAWVPQ GKPVWLTEVG CPAVDKGANQ PSVFPDPKSS ENHLPYFSSG SRDDLIQRRY LQAFLGKLDP SFGAADADNP VSPVYGRRMI EPSAIHLWTW DARPYPAFPA ATDVWSDGPN WRTGHWLTGR LGTAPMDALV QALLADCGVT GADTSALRES CDGYVIDRPM SPRAMIEPLA GAYAFDATAA DGTLRFVSRG GVPVAEFAED DLVLPDDGAP ARLTRAQETE LPREAGFGFT DGTVDYRRSA VTSRRLAGGS NRSVHSALAV VSDDAAMSRR AEVWLQDLWA GRESAAFSLG PQCLSLTPGD VIAVTINGRR RLFEIDATVD AEARQVTARS IDPEVFSVPL STPRQTRPAI PAALGPVQAA VLDLPTIDSS QPPILTRLAV FASPWPISVT VWTSPDGASF QPAAIAPVPA TSGETLDPLP AGPAGRWDRG NTVRVRLYGG ALTSVCDARV LGGANAAAVR TTDGEWEILQ FANAELVDGG TYRLSRLLRG QAGSEYAIAD VLPAGAPFVL LDTHLVPLSR GLNALGRPIL VRLAAAGRNH DDPTAVALTV TPRPTALLPL SPVHVKALRE SGGVRISWIR RTRIDGDGWG VEVPLGEDSE AYTLDVFSGG TIVRSIACST PEAFYADADE LADFGTPQGS LHLRVAQVSA TVGAGHPTEL TLTL
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