Gene Nham_1425 details

Gene Information

• Locus tag: Nham_1425
• ID: 4033285
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1606107
• End bp: 1606553
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637969899
• Product: putative phage cell wall peptidase, NlpC/P60
• Protein accession: YP_576707
• Protein GI: 92116978
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)
• TIGRFAM ID: [TIGR02219] putative phage cell wall peptidase, NlpC/P60 family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.987812
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACATTCC CACATACGAC CCGCGCGGCC GTCGTCGCGG AAGCCCGCGC GTGGATCGGC 
ACGCCCTATC GCCATCAGGC TTCGCTCAAG GGTATCGGCT GCGACTGTCT CGGCCTCGTG 
CGCGGCGTCT GGCGCAACTG CATCGGGGAC GAGCCGGAAG CGCCGCCGCC CTATGCGCCG 
GACTGGGCCG AAGCAAAAGG CGACGAGACG CTGGCGGCGG CGGCGCTGCG CCATCTCATT 
CCCGTCGCGC GCGACGACCT CAAGCCGGGC GACGTGCTGC TGTTCCGCTG GCGCGATGGT 
TTCGTCGCCA AGCATGTCGC GATCGCATCG AGCGAACGCA CCATGATTCA TGCGCACGAC 
GGCGCGGCTG TTTGCGAGAT CGCGCTGGCG CCGTGGTGGC GGCGACGGCT GGCTTACGCA 
TTTCGTTTTC CGGGAGTTTT GGCCTGA 

 

Protein sequence

MTFPHTTRAA VVAEARAWIG TPYRHQASLK GIGCDCLGLV RGVWRNCIGD EPEAPPPYAP 
DWAEAKGDET LAAAALRHLI PVARDDLKPG DVLLFRWRDG FVAKHVAIAS SERTMIHAHD 
GAAVCEIALA PWWRRRLAYA FRFPGVLA