Gene Nham_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1423 
Symbol 
ID4033283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp1604559 
End bp1605200 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID637969897 
Producthypothetical protein 
Protein accessionYP_576705 
Protein GI92116976 
COG category[S] Function unknown 
COG ID[COG5448] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02217] conserved hypothetical protein TIGR02217 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.750454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCT TCCACGAAAT CCTGTTTCCG CTCGATGTCG CGCTCAAAAG CGCGGGCGGG 
GCGGAGCGGC GCACCGACAT CGTCAGCTTC GGCTCGGGTC GCGAGGCGCG TAATGCGCGC 
TGGGCGCAGT CGCGGCGGCG CTACGACGCT GGCTACGGTG TCAAGACGCT CGATGCCTTG 
CAGGCCGTCA TCGCCTTCTT CGAGGAACGG CGCGGCCGGC TCTACGGCTT TCGCTGGCGC 
GACCGGCTGG ATTGCTGCTC GGCGGCGACC GGCATCGCGA TCTCGCCGCT CGATCAGGTC 
ATCGGCGTCG GCGACGGCAC GACATCAGTG TTTCAATTGG TGAAGACCTA TGGAGGTGCG 
TTCGCGCCTT ATGCGCGCGC GATCGCCAAG CCGGTGAACG GCAGCGTGCG CGTTGCTGTT 
GCCGATAGCG AGGTCGCGGC CGGATCGGCC TTCACCTGCG ATGCCACCAC CGGCGTCGTG 
ACCTTTCTCG CCGGGCATAT CCCGCCGGCG GGAGCGGCGG TCACGGCGGG ATTCAATTTC 
GACGTGCCGG TGCGGTTCGA CACCGACTAC CTCGAGGTCG ATCTGGCGAC CTTCGCCGCC 
GGCGCCATTC CGAAGATCCC GCTGGTGGAG ATCCGCCCGT GA
 
Protein sequence
MTSFHEILFP LDVALKSAGG AERRTDIVSF GSGREARNAR WAQSRRRYDA GYGVKTLDAL 
QAVIAFFEER RGRLYGFRWR DRLDCCSAAT GIAISPLDQV IGVGDGTTSV FQLVKTYGGA 
FAPYARAIAK PVNGSVRVAV ADSEVAAGSA FTCDATTGVV TFLAGHIPPA GAAVTAGFNF 
DVPVRFDTDY LEVDLATFAA GAIPKIPLVE IRP