Gene Nham_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1413 
Symbol 
ID4032331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1598382 
End bp1599029 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID637969887 
Productpeptidase U35, phage prohead HK97 
Protein accessionYP_576695 
Protein GI92116966 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCCC CGTTGTCATC CGTGTCGCGT CTGTCGTTCT CCGGCGACGG TACGGTGGAA 
GGTTATGCCA GCCTGTTCGG CGAGATCGAC CAGGCGCGCG ACATGGTGAT GCCTGGCGCG
TTCGCGCAAA CGCTGAAGGT GCGGGGGTTG CGCAAAGTTC CGATGCTGTT CCAGCACGAT
CCATCGGAGC CGGTCGGCAT CTGGCTCGAA CTGCGCGAGG ATTTTCGCGG GCTGTGGGCA
CGTGGCCGGC TGATCCCCGA CGTGATGCGC GCGCGCGAAT TGCTGGCGCT GGTCGAGGCC
GGCGCGGTGG ACGGACTGTC GATCGGCTAC CGCACCGTGC GCGGCCAAAT CGAGCCGCGC
ACCCGCGTGC GAAAGCTCTA TCAGGTCGAC TTGTGGGAAA TTTCCATCGT TACGTTCCCG
CTGCTGGCGG GAGCGCGTGT CCGCGCGGTG AAGCAGGCGG CGCTGCCGCC GCGTTCGCTT
GTGCGGACAC AGGCCGAGCG CGAATGGCGG AGCATGACGG AGGCCGCGGA TGAACCGGCG
CCGCGGCTCC GCCCGCGCCC GGCGGTGGTT TCGGCGTCGC TGCGTAGCCG CGAGGGGCGG
CGCAGCGCAT TGGGCACTGT ATCGCACCGA TATTCGATGC TGCGATGA
 
Protein sequence
MHAPLSSVSR LSFSGDGTVE GYASLFGEID QARDMVMPGA FAQTLKVRGL RKVPMLFQHD 
PSEPVGIWLE LREDFRGLWA RGRLIPDVMR ARELLALVEA GAVDGLSIGY RTVRGQIEPR
TRVRKLYQVD LWEISIVTFP LLAGARVRAV KQAALPPRSL VRTQAEREWR SMTEAADEPA
PRLRPRPAVV SASLRSREGR RSALGTVSHR YSMLR