| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1408 |
|---|
| Symbol | |
|---|
| ID | 4032326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1594836 |
|---|
| End bp | 1596104 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637969882 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_576690 |
|---|
| Protein GI | 92116961 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5323] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGG ACGAACTCGG ATTTCTCGCC CGGCAATGGG ATATTTTCGC GCACCCGCAT
CAGCGTCCGC CGGAACTCGC GCCGAATGGT GCGCCGTGGC TGATCTGGCT GATGGTCGGC
GGCCGCGGCG CCGGCAAGAC CCGCGCCGGG GCCGAATGGA TTCGCGCGCA GGCGCTGGGT
CTTGCGCCGT TCGCCGTTGA GGCGGTGTCG CGCATCGCGC TGGTCGGCGA AACCGAACAT
GATGCGCGCG AGGTGATGAT CGAAGGCGTC TCCGGTCTGC TCGCGGTTCA TGCCGCCCAC
GAGCGGCCGG CGTGGTCGCC GTCGCGCAAG CGGCTGGAAT GGAGCAACGG TGCGGTGGCG
CAGGCGTTTT CCGCCGACGA TCCCGAAAGT TTGCGCGGGC CGCAGTTCGG CTGCGCCTGG
TCCGACGAGA TGGCGAAGTG GCGCTACGCG GAGGCCGCGT TCGACATGCT GCAGTTCGGT
TTGCGGTTGG GGTCGCAGCC GCGCCAGCTC ATTACCACAA CGCCGCGGCC GACCGCGCTT
TTGAAACGCC TGATGGCCGA TCCGGCGAGC GTGGTCTCGC GCGCGCCGAC GCAAGCCAAC
GCCTTCAACC TTGCGCCGAC CTTTCTGCAA GGCGTGATGG CGCGCTACGC CGGAACGCGG
CTCGGGCGTC AGGAGCTTGA CGGCGAGATC ATCGAGGACC GGCCGGATGC GCTGTGGTCG
CGCGCGCTGC TGGAGCGATG TCGCGTACAC GAGGCGCCGC CGTTGCAGCG CATCGTGGTC
GCGGTCGATC CGCCGGCGAC GTCGAGTAAA CGTGCAGACG CCTGCGGCAT CGTCGCCGCG
GGTCTGGCGG AGGGCGGCAT GGTTTATGTG ATCGCCGACG AGACGGTGGC GGGCGTCACG
CCGGCGCTGT GGGCGGCGAA GGCGATCGCG CTGTGGCGTC GGTGCGAGGC CGATGCGCTG
GTCGCGGAAG TCAACCAGGG CGGCGACATG GTGAAAGCCG TGATCGCCGA GGTCGACGCC
GCGGTGCCGG TGATCCCGGT GCGCGCGACA CGCGGCAAAT GGCTGCGCGC CGAGCCGGTG
GCGACGCTTT ATGAGCAGGG CCGCGTCAGG CACGCCGGCA GCTTCGCCGC GCTGGAAGAC
GAGATGTGCG ACTTCGCCCT GTCGGGCCTG TCGTCCGGGC GTTCGCCCGA CCGGCTCGAT
GCGCTGGTGT GGGCGGTGAC GTCGCTGGCG CTGGCGCCGC GCGCCCAGCC GCGGGTGAGG
GGATTGTAG
|
|---|
| Protein sequence | MNEDELGFLA RQWDIFAHPH QRPPELAPNG APWLIWLMVG GRGAGKTRAG AEWIRAQALG
LAPFAVEAVS RIALVGETEH DAREVMIEGV SGLLAVHAAH ERPAWSPSRK RLEWSNGAVA
QAFSADDPES LRGPQFGCAW SDEMAKWRYA EAAFDMLQFG LRLGSQPRQL ITTTPRPTAL
LKRLMADPAS VVSRAPTQAN AFNLAPTFLQ GVMARYAGTR LGRQELDGEI IEDRPDALWS
RALLERCRVH EAPPLQRIVV AVDPPATSSK RADACGIVAA GLAEGGMVYV IADETVAGVT
PALWAAKAIA LWRRCEADAL VAEVNQGGDM VKAVIAEVDA AVPVIPVRAT RGKWLRAEPV
ATLYEQGRVR HAGSFAALED EMCDFALSGL SSGRSPDRLD ALVWAVTSLA LAPRAQPRVR
GL
|
|---|
| |