| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1405 |
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| Symbol | |
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| ID | 4032323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1591912 |
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| End bp | 1593471 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637969879 |
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| Product | major facilitator transporter |
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| Protein accession | YP_576687 |
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| Protein GI | 92116958 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAG TCGAGCGCCC CGGTCGGGGG CCGTCCGCCC CCCCGATTCG GTCTGGCAAC
ATCTCCCGCG AAGTCGCCGC GCGTCACGGC CCGGCCGCTG GCGACGCCGA TGCGTCGACG
GTCGCGCCGC CCGTGCCGCT GAGCCAGAGC GAAGTCCGCA CCATCCTGGC CAGCCTGATG
CTGACGATGT TCCTGGCCGC GCTCGACCAG ACCATTGTCG CAACCGCGCT GCCGACCATC
GGCCGCCAGT TCCACGACGT CACCACCCTG TCGTGGATCA TCACGGCGTA TCTGCTGGCG
TCGACCGCGG TCGCGCCGCT GTTCGGCACG CTGAGCGACA TCTACGGCCG CCGCGCCATG
ATCGTCACCG CACTCGGTCT GTTCGTCGCG GGCTCGGTCT TGTGCGCGCT GGCGCCGAAC
ATGACGACGC TGATCGTCGC GCGCGGGGTG CAGGGCCTCG GCGGCGGCGG CATCCTGCCG
GTGGTGCAGA CGGTGATCTC CGATGTGGTG ACGCCGCGCG AGCGCGGCCA GTATCAGGCC
TATTTCAGCG GCGTGTGGAC CGCGGCCGGC ATCGCCGGAC CGGTGCTGGG CGGTGTGTTC
GCCGAGCACC TGCATTGGTC GATGATCTTC TGGATCAATG TGCCGCTCGG CGTCGTCTCG
CTGGCGATGC TGCTGCCGAA GATGGGAAAG CTCCCGGTGT TCCACCGTCG CCGCAAGGTG
GACTGGGCCG GCGGCCTGCT GCTGATGGCG TCCGCCGTGG TGTTCATGCT GGTGCTGACA
TGGGGCGGCA ACCGCTTCGC CTGGCTGTCG CCGGCAATCG CCGCCATGCT CGGCGGCTCG
CTGGTGCTTG CCGCCGTCTT CGTCTGGCAC GCGCGGACGA CGCCCGAGCC GTTCCTGCCG
CTGTCGCTGA TAGGCGGCCC GGTTGTCCCC TACGCGATCG CGGCCGGCGC CTTCGCGCTC
GGCTCCATCA TCGGGATCAC CGTGCATCTG CCGCTGTATT ATCAGGTGGT CCATCATCTC
AGCGCCAGCG AATCGGGGCT GGCGTTGATT CCGATCGCCG CGATCTCGAC CGGCGGCGCG
GCGCTTGCCG GCCGCACCAT GGTGCGGGCG GTTCACTACA AGCGGGTCGC GATCGTCGGG
AACGCATTCG CCGCCGTCAT CGCCGCGATC CTGGCGATTG TCGTGATGCC GTTGTGGCCG
CTGCTGGCGC TGCTCTCGCT GTTCGCCTTC GGTCTCGGCA CCACGTTTCC CGTCAGCGTG
GTGTCGCTGC AGAACGCGGT GGCGCGGCCG CAGGTCGGCA CCGTCACCGG CGCGATGAAT
TTCTTCCGCG CGCTGGCCGC GTCGTTCACC GTCGCCGCAT TCTCCGCCAT CCTGTTGATG
GCGCTGGGTG CGGATGTCTC GATCGGCAAT GACGGCGGCG GTCAGGTCGA TGCGATCTCC
GCGGCCGATC TGACGGCGGC ATTCCGCTAC GTGTTCGCCG CCGCCGCAGC GATGCTGGCG
GGCGCGGCGC TACTGCTGAC GCTGATGGAG GAGCGGCCGC TCGCCGGCCC CGCGGTGTGA
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| Protein sequence | MNTVERPGRG PSAPPIRSGN ISREVAARHG PAAGDADAST VAPPVPLSQS EVRTILASLM
LTMFLAALDQ TIVATALPTI GRQFHDVTTL SWIITAYLLA STAVAPLFGT LSDIYGRRAM
IVTALGLFVA GSVLCALAPN MTTLIVARGV QGLGGGGILP VVQTVISDVV TPRERGQYQA
YFSGVWTAAG IAGPVLGGVF AEHLHWSMIF WINVPLGVVS LAMLLPKMGK LPVFHRRRKV
DWAGGLLLMA SAVVFMLVLT WGGNRFAWLS PAIAAMLGGS LVLAAVFVWH ARTTPEPFLP
LSLIGGPVVP YAIAAGAFAL GSIIGITVHL PLYYQVVHHL SASESGLALI PIAAISTGGA
ALAGRTMVRA VHYKRVAIVG NAFAAVIAAI LAIVVMPLWP LLALLSLFAF GLGTTFPVSV
VSLQNAVARP QVGTVTGAMN FFRALAASFT VAAFSAILLM ALGADVSIGN DGGGQVDAIS
AADLTAAFRY VFAAAAAMLA GAALLLTLME ERPLAGPAV
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