Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1403 |
Symbol | |
ID | 4032321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1588509 |
End bp | 1590791 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637969877 |
Product | penicillin-binding protein 1A |
Protein accession | YP_576685 |
Protein GI | 92116956 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCAACA TCCTGCCCTC CGATTGGAAA AAGCGAATCC GGCATGTCCT GCTGGACTTC GATGCGCGCA TCGATTCGAC GCTGTTCTCC TCGGCGGTGG GCGCGCGCGA ACTTTACGAG CGCTTCTCCA CCTTCATGGA CCGCTTCTAT GTCGGCCGCT GGAAACGCTG GGTGTTCGTC GAGCCGTTGT CGGAAGCCGC AACGCTCGGC CTCGGCGGTC TCATCGTCCT GCTGGCGCTG GCGCAGCCGG CGTTCCGCGA AACCGCGGAC GAGGACTGGC TGAAGAAATC CGATCTCGCG GTCACGTTCC TCGACCGCTA CGGCAACCCG ATCGGCAGCC GCGGCATCAA GCACAACGAT GCGATACCGC TGGAAGATTT TCCCGACAAC CTGATCAAGG CGACGCTCGC GACCGAAGAC CGCCGCTTCT ACGATCACTT CGGCATCGAC GTCGGCGGCA CCTTCCGCGC GCTGGTGACC AACGCGCAGG CCGGCGGCGT GCGGCAAGGC GGTTCCTCGA TCACCCAGCA ACTCGCGAAA AACCTGTTCC TCTCCAACGA GCGCACCATC GAGCGCAAGA TCAACGAGGC CTTCCTCGCG ATCTGGCTGG AAACCCGACT GACCAAGAAC GAAATCCTGA AGCTGTATCT CGACCGCGCC TACATGGGCG GCGGCACCTT CGGCGTCGAC GGCGCGGCGC ATTTCTACTT CAACAAGTCG GTGCGCGACG TCAATCTCGC CGAAGCCGCG ATGCTCGCCG GCCTGTTCAA GGCGCCGACC AAATACGCGC CGCACATCAA CCTGCCCGCC GCCCGTGCCC GCGCCAACCA GGTGCTCGAC AACATGGTCG ATGCGGGCTT CATGACCGAG GGCCAGGTGT TCGGTGCGCG GCGCAACCCC GCCACCGCAG TCGACCGCCG CGACGAGAAC TCGCCGAACT ACTATCTCGA CTGGGCCTTC GACGAGATGC GCAAGCTGGT CGATACGTTT CCGCGCTCCT ATACCGAGCG CGTGTTCGTG GTGCGCACCG CCATCGACAT GAATGTGCAG CACGCAGCAG AAGAGGCGAT CGAGAACCAG TTGCGCCAGT TCGGCCGCGA CTATCACGCG ACCCAGGCCG CCACCGTGGT CGCGGATCTC GACGGCGGCG TGCGCGCGAT GGTCGGCGGT CGCGATTACG GCGCCAGCCA GTTCAATCGC GCGACCGACG CCATGCGCCA GCCCGGATCG TCGTTCAAGC CGTATGTCTA CACCACCGCG CTGCTCAACG GCTTCAAGCC GACCTCCACG ATCGTCGACG GCCCCGTCTG CCTCGGCAAC TGGTGCCCGC AGAACTACGG TCATTCCTAC TCCGGCAAGG TGACATTGAC CCAGGCGCTG ACCCGCTCGA TCAATGTCAT CCCGGTGAAG CTGTCGATCG CGCTCGGCGG CAACCCACGC AACGTCTGGG CCAGCGCCAA GAAGGGCCGG CAAATGATCG TCGAGACGGC GCACAAGTTC GGCATCGTCA CGCCGCTGCC CGATACGCCC TCGCTGCCGA TCGGCGCCGA CGAGGTCAAC GTGCTCGAAC ACGCCGTCGC CTATGCCACG TTCCCGAACA AGGGCAAGGC GGTCACGCCG CACGCGGTTC TGGAAGTCCG CACCGGCGCC GGCGATCTGG TCTGGCGCTA CGACCGCGAT GGCCCCAAGC CGCGCCAGAT CATTCCACCC TCGGTCGCCG CCGATATGGC GATGATGATG AGCCACGTGG TCAGTGAAGG CACCGCGCGG CGCGCCATCC TCGACGGCAT TCCGGCGGCG GGCAAGACCG GCACCACCAA CGCCTACCGC GACGCCTGGT TCGTCGGCTA CACTGGCAAC TTCGTGTGCG GAGTCTGGTA CGGCAACGAC GACTACTCGC CGACCAACCG CCTGACCGGT GGTGCGCTGC CTGCCCAGAC ATGGCATGAC ATCATGACGG CCGCGCATCG CGGCGTCGAA ATCAAGGACA TTGCCGGTGT TGCGGCGCCG GCGAAACCGA CCGCTGCCGC CGCCAAAACC GCAGGCAGCG AAGACAATGC AAATCCCGCG CCGCCGCCCA TCCTGACCAA GCGCGGCGCC GAGATCCTGG TGCGCGTGGA AAAGATGCTG GATCAAGCAG GCAAGACAAT CGGAAAAACC TCGGCCGCCG AACCGGTCAA TCCAGCTCCC TCCGGCGCGC CTCGCCCCGT TTCGACCGGC GCCGACAACC TCGCGGCCGC AACGTCCGGC GACCGAGCGA CGCTGTCGCC TCCCAAGAAC TAG
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Protein sequence | MRNILPSDWK KRIRHVLLDF DARIDSTLFS SAVGARELYE RFSTFMDRFY VGRWKRWVFV EPLSEAATLG LGGLIVLLAL AQPAFRETAD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND AIPLEDFPDN LIKATLATED RRFYDHFGID VGGTFRALVT NAQAGGVRQG GSSITQQLAK NLFLSNERTI ERKINEAFLA IWLETRLTKN EILKLYLDRA YMGGGTFGVD GAAHFYFNKS VRDVNLAEAA MLAGLFKAPT KYAPHINLPA ARARANQVLD NMVDAGFMTE GQVFGARRNP ATAVDRRDEN SPNYYLDWAF DEMRKLVDTF PRSYTERVFV VRTAIDMNVQ HAAEEAIENQ LRQFGRDYHA TQAATVVADL DGGVRAMVGG RDYGASQFNR ATDAMRQPGS SFKPYVYTTA LLNGFKPTST IVDGPVCLGN WCPQNYGHSY SGKVTLTQAL TRSINVIPVK LSIALGGNPR NVWASAKKGR QMIVETAHKF GIVTPLPDTP SLPIGADEVN VLEHAVAYAT FPNKGKAVTP HAVLEVRTGA GDLVWRYDRD GPKPRQIIPP SVAADMAMMM SHVVSEGTAR RAILDGIPAA GKTGTTNAYR DAWFVGYTGN FVCGVWYGND DYSPTNRLTG GALPAQTWHD IMTAAHRGVE IKDIAGVAAP AKPTAAAAKT AGSEDNANPA PPPILTKRGA EILVRVEKML DQAGKTIGKT SAAEPVNPAP SGAPRPVSTG ADNLAAATSG DRATLSPPKN
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