Gene Nham_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1397 
SymbolflhB 
ID4031888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1580833 
End bp1581912 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content63% 
IMG OID637969871 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_576679 
Protein GI92116950 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.247493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACG AGAGCGACGA TACCGAGAAG ACAGAAGATC CGACTCAAAA ACGCCTCGAC 
GATGCGCTCG AGCGTGGCGA CGTCGCCAAG AGCCAGGAGG TCAACACCTG GTTCGTGATT
GCCGGTGCGA CGCTGGTGCT GGCGACGTTT GGAGGCTCGG TCGGCGGCGG CGTCGAGATG
CCGCTGCGCA ACCTGATCGC CAATTCCTGG CAGATCCGGA CCGACGGCCC CGGCCTTTTG
GCGCTGGCCC AGCAGCTCGA ATACATCCTC GCCGCCGCGC TCGGCCTGCC GCTGCTGATG
CTGATGCTGG CCGCCATTGC CGGCAACGTC GTCCAGCACC GCTTCGTCTG GTCGGGGGAA
ACGCTCAAGC CGAAGCTCAG CAAGATTTCA GTGGTGTCCG GCGCCAAGCG GATTTTCGGC
AAGCAGGCCG CCGCAAACTT CGCCAAGGGA CTTTTCAAGG TGCTGGCGCT CGGCGCGGTC
ATGACAGCGG TGCTCTGGCC GGAGCGATCG CGGCTCGATG CCTTGGTACG GCTCGACCCG
AACGCCATCC TCCCCACCAC CACGACCCTG ACGTTGCAAT TGCTCGGTGC GGTTGTTGCG
ATGCTCGCGC TGGTCGCGAT CGCAGACTAC CTGTTCCAGT ACCGGCAGTG GTTCGAGCGG
CAGAAGATGT CGCTGCGGGA GATGAAGGAG GAGTTCAAGC AGTCGGAAGG CGATCCGCAC
ATCAAGGCCC GGATCAGGCA ATTGCGCCAT GCCCGCATGA AGAAGCGCAT GATGGCCGCG
GTGCCCAAGG CTTCGGTCAT CATCACCAAT CCGACGCACT ATTCGGTCGC CTTGTCCTAC
GAGCGCGGTA TGTCGGCGCC GGTCTGCGTC GCCAAGGGCA TGGACAACAT CGCGCTCAAG
ATCAGGGAGA TCGCCCGCGA GCACGACATT CCGATTGTCG AAAACGTACC GCTGGCCCGC
GCGCTGTATG CCACCGTCAA GATCGACGAC GAGATTCCGG TCGAGCACTA TCACGCGGTC
GCCGAAATCA TCGGCTACGT CATGGGCCTG AAGCACGGCT TTTCGAGACG CCGTGCCTGA
 
Protein sequence
MADESDDTEK TEDPTQKRLD DALERGDVAK SQEVNTWFVI AGATLVLATF GGSVGGGVEM 
PLRNLIANSW QIRTDGPGLL ALAQQLEYIL AAALGLPLLM LMLAAIAGNV VQHRFVWSGE
TLKPKLSKIS VVSGAKRIFG KQAAANFAKG LFKVLALGAV MTAVLWPERS RLDALVRLDP
NAILPTTTTL TLQLLGAVVA MLALVAIADY LFQYRQWFER QKMSLREMKE EFKQSEGDPH
IKARIRQLRH ARMKKRMMAA VPKASVIITN PTHYSVALSY ERGMSAPVCV AKGMDNIALK
IREIAREHDI PIVENVPLAR ALYATVKIDD EIPVEHYHAV AEIIGYVMGL KHGFSRRRA