Gene Nham_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1388 
Symbol 
ID4031879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1571467 
End bp1572267 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID637969862 
Producthypothetical protein 
Protein accessionYP_576670 
Protein GI92116941 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0881994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCT TCAGGGACAT CCGGGTCATT CCGGTCGTGG CGGTCGCGAT CTTCGGCCTC 
GCGGTGCTCA AGGTCGCGGG GCTCGTGGTC GATGGCGGCT ACGTCTTCGA TGATCGGCCG
AATTCGACCG GACTGTCATG GGCCCAGGAA AACCTGAATT TTCCGGGCGG AACTCGCGAT
GCCGGCGACA TCACCGGATC GGTCGAGGCG AAGAAAGACG AATCGAAGAA GGATACTGCC
GGCAAGGATG AGGCGAAGAA GGAAGAGTCC AAACCGGGCG CTCCCGAAGT AGCGAAGGCG
GGCGCGATCA CCATCCCCGA GCCGGGGCAG TCGGTGTCGC CTTCCGAACG CGCGATCCTC
GAACGGCTTC AGAGCCGGCG GCAGGAACTC GAAGCGCGCG CTCGGGAAAT CGACATTCGC
GAGAGCCTTT TGAAATCCGC CGAAAAGCGC CTCGAGGGCC GCGTCGAGGA GATGAAGGGC
ATCGAGGCAC GGATCGCGAC CGCGACCGGG CAGAAGAACG AAGCAGAGGC CGCCCGCTTC
AAGGATATCG TGACAACGTA CGAGAACATG AAGCCGAAGG ACGCAGCCAA GGTGTTCGAC
CGCCTGGAAA TGTCCGTGCT GTTCGAGATC GCCTCGAAGA TTGCGCCGCG CAAGATGGCG
GACATTCTCG GTCAGATGTC GCCCGAGGCG GCCGAACGGC TGACGGTCGA ACTGGCGCGC
CGTGCCAGCG GCGACACCAC CACCGCGGCC GCCGATCTTC CGAAGATCGA GGGCAAGCCG
ACGCCGCAAG CTCGCAACTG A
 
Protein sequence
MNAFRDIRVI PVVAVAIFGL AVLKVAGLVV DGGYVFDDRP NSTGLSWAQE NLNFPGGTRD 
AGDITGSVEA KKDESKKDTA GKDEAKKEES KPGAPEVAKA GAITIPEPGQ SVSPSERAIL
ERLQSRRQEL EARAREIDIR ESLLKSAEKR LEGRVEEMKG IEARIATATG QKNEAEAARF
KDIVTTYENM KPKDAAKVFD RLEMSVLFEI ASKIAPRKMA DILGQMSPEA AERLTVELAR
RASGDTTTAA ADLPKIEGKP TPQARN