| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1386 |
|---|
| Symbol | fliM |
|---|
| ID | 4031877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1569834 |
|---|
| End bp | 1571039 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637969860 |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_576668 |
|---|
| Protein GI | 92116939 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1868] Flagellar motor switch protein |
|---|
| TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.449583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACG ATAACGATCA GCTCGACCAG GATGCAATCG CAGCCCAGTG GGAAGCCTCG
CTCGACTCGG AGGATCCCGC CGAGGCCGCG AAGTCGGCCG CCGCCAATGA ACTTACGGAG
GCGATGGCGG AACAGTGGGC CGCCATGGTC GACGACGGCG GCCGCAATTT CGGCAGCGGC
AAGAACGGCG GCGAACGGGT GCTGTCGCAG GAGGAAATCG ACAGCCTGCT TGGCTTCAGC
GTCGGCGAGA TCAACGTCGA CGACAATTCC GGCATCCGGG CGATCATCGA CTCGGCGATG
GTGTCGTATG AGCGCCTGCC GATGCTGGAG ATCGTGTTCG ACCGCCTGGT GCGGCTGATG
ACGACCTCCT TGCGCAATTT CACCTCCGAC AACGTCGAGG TCTCGCTCGA CCGCATCACC
TCGGTCCGCT TCGGCGACTA CATGAACTCG ATTCCCTTGC CCGCGGTGCT CAGCGTGTTC
AAGGCCGAGG AGTGGGAGAA CTTCGGGCTG GCGATGGTCG ATTCCAGCCT GATCTACTCC
ATGATCGACG TGCTGCTCGG CGGCCGTCGC GGCCAGACTT CGCTCCGGAT CGAAGGCCGG
CCCTACACCA CGATCGAAAC CAATCTGGTG AAGCGGCTGG TCGAGGTCGT GCTGGCCGAT
GCCGAGCAGG CGTTCCGGCC GCTGTCGCCG GTGACGTTCT CGATCGACCG GCTTGAGACC
AATCCGCGTT TCGCGGCGAT CACCCGCCCG GCCAACGCGG CGATCCTGGT CCGTCTACGG
ATCGACATGG AAGACCGCGG CGGCACCATC GAACTGCTGC TTCCCTACGC CACCATCGAG
CCGATCCGCA ACGTGCTGTT GCAGATGTTC ATGGGCGAAA AGTTCGGCCG CGATCCGATC
TGGGAGAGCC ACCTCGCCAC CGAGATCGCG CAGGCGCAGA TCGCCGTCGA CGCGGTGCTG
TACGAGGCCG AAATCCCGCT CAAGCAGCTC ATGGCCCTGA AGGTCGGCGA CACGCTGCCG
CTGGACATGC GCCCCGATGC GTCGGTGGCG GTGCGCTGCG GCAGCGTCAC GCTGACCGAA
GGCCGCATGG GGCGCGTCGG CGACCGCGTC GCCATTCGCG TGTCGAGGCA TTTGCGCAAA
CCGAACACGA CCTTCGCCAT GTTCGAGAGG GCGGACGAAC AGACCAAGAT GATGGAGGCC
CAATGA
|
|---|
| Protein sequence | MADDNDQLDQ DAIAAQWEAS LDSEDPAEAA KSAAANELTE AMAEQWAAMV DDGGRNFGSG
KNGGERVLSQ EEIDSLLGFS VGEINVDDNS GIRAIIDSAM VSYERLPMLE IVFDRLVRLM
TTSLRNFTSD NVEVSLDRIT SVRFGDYMNS IPLPAVLSVF KAEEWENFGL AMVDSSLIYS
MIDVLLGGRR GQTSLRIEGR PYTTIETNLV KRLVEVVLAD AEQAFRPLSP VTFSIDRLET
NPRFAAITRP ANAAILVRLR IDMEDRGGTI ELLLPYATIE PIRNVLLQMF MGEKFGRDPI
WESHLATEIA QAQIAVDAVL YEAEIPLKQL MALKVGDTLP LDMRPDASVA VRCGSVTLTE
GRMGRVGDRV AIRVSRHLRK PNTTFAMFER ADEQTKMMEA Q
|
|---|
| |