Gene Nham_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1336 
Symbol 
ID4032099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1513747 
End bp1515333 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content63% 
IMG OID637969812 
Producthypothetical protein 
Protein accessionYP_576620 
Protein GI92116891 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTA TCGTTCTCTC GGCGTCCGTG CGCCAGAACC TCCTCTCCCT CCAGTCCACC 
GCCGATCTGC TCTCCACCAC GCAAAACCGT CTTGCCACCG GCAACAAGGT CAACTCGGCG
CTCGACAACC CGACCAACTT CTTCACCGCG CAGGGCCTCG ACAACCGCGC CGGCGACATC
AACAACCTGC TCGACTCGAT CGGCAACGGC GTGCAGGTGC TGCAGGCTGC CAACACCGGT
ATCACCTCGC TGCAGAAGCT GGTCGATACC GCGAAGTCGA TCGCCAACCA GGCGCTGCAG
ACCCCGTCGG GCTATTCGCA GAAGTCGTCG GTGACGACCG CGGCGATTAC CGGTGCAACC
GCCGACGACC TGCGTGGCAC TCCTGTCGGC GGCAGCGCGG CGACCTCGGG CTCCCTGACT
GCGGGTGCGT TTACGGCGGT CGACGTCTCT GCCACCAAGT CGATGGCCTT CACCGTTACG
GTTGATGGCG GTACGGCTCA GAACGTCACG CTGGATGCTG CGGCCGTTAC GGCCTACAAC
ACGGCGCATT CCGCTTCGCT CAACGCTGCC AGCCTGAGTG CGACGGACGT TGCCAACCTC
GTGAACGATC AGATTACTGG CGCTGTTGTT TCCGTTGTCG GCGGCAACCT GACCTTCACG
TCCAGTTCAA CCGGAATCTC GTCCAACGTT GCGACGTCCG CGGTGACTGC GACGAATACC
CCGGGCGGTT CGACCGGTAT TACAGCTGCG ACTGGCACCG CCGGTGCGGC CGCTGTCGCT
GGCGTCTCGC CGCTCGATAC GCTGACCCTC ACGGTCGGCG CGACCGGCGG CGGAACGGCG
ACCAACATCA CCTTCGGCGA CGGCACGGCC GGTACTGTCA AGTCGTTGAA CCAGTTGAAC
GACAAGCTTG CTGCAAACAA CTTGATGGCA ACGTTGAGTT CCGACGGCAA GCTTACCATC
AGCACCACCA ACGACGCGGC CTCGGCAACG ATGGGCACGA TCGGCGGTTC CGCCGCGGGT
GCTGGCAAGG CGTTCAACGG GCTTGCTGGC GGCGCACCGA CCCAGGACCA GAACTCGCTG
ACGGCTCGTG CAAGTCTCGT CGCTCAGTAC AACACCATCA TCGACCAGAT CAAAACCACG
GCGCAGGACT CTTCGTTCAA CGGCGTCAAC CTGCTGAACG GCGACCAGCT CAAGCTGGTG
TTCAACGAAA CCGGAAAGTC GACGCTGAAC ATCCAGGGCG TGACCTTCGA CCCGGCCGGT
CTCGGCCTGT CGAAGCTGAC CTCCGGCACC GACTTCCTCG ACAACGCCTC GACCAACAAG
GTGCTCGACA CGTTGAGCAA CGCCTCCAGC TCGCTTCGCT CGCAGGCGTC GGCCTTCGGT
TCGAATCTGT CGGTGGTGCA GATCCGTCAG GACTTCAACA AGAACCTGAT CAACGTGCTG
CAGACCGGCT CGTCGAACCT GACGCTGGCC GACACCAACG AGGAAGCGGC CAATAGCCAG
GCGCTGTCGA CCCGCCAGTC GATTGCGGTC TCCGCCCTGG CGCTGGCCAA CCAGTCGAAC
CAGAGCGTGC TGCAGTTGCT GCGCTAA
 
Protein sequence
MSGIVLSASV RQNLLSLQST ADLLSTTQNR LATGNKVNSA LDNPTNFFTA QGLDNRAGDI 
NNLLDSIGNG VQVLQAANTG ITSLQKLVDT AKSIANQALQ TPSGYSQKSS VTTAAITGAT
ADDLRGTPVG GSAATSGSLT AGAFTAVDVS ATKSMAFTVT VDGGTAQNVT LDAAAVTAYN
TAHSASLNAA SLSATDVANL VNDQITGAVV SVVGGNLTFT SSSTGISSNV ATSAVTATNT
PGGSTGITAA TGTAGAAAVA GVSPLDTLTL TVGATGGGTA TNITFGDGTA GTVKSLNQLN
DKLAANNLMA TLSSDGKLTI STTNDAASAT MGTIGGSAAG AGKAFNGLAG GAPTQDQNSL
TARASLVAQY NTIIDQIKTT AQDSSFNGVN LLNGDQLKLV FNETGKSTLN IQGVTFDPAG
LGLSKLTSGT DFLDNASTNK VLDTLSNASS SLRSQASAFG SNLSVVQIRQ DFNKNLINVL
QTGSSNLTLA DTNEEAANSQ ALSTRQSIAV SALALANQSN QSVLQLLR