Gene Nham_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1330 
Symbol 
ID4032093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1504461 
End bp1504976 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID637969806 
Productmethionine sulfoxide reductase B 
Protein accessionYP_576614 
Protein GI92116885 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC GCCGTATCCT GCTCGCATCC GCCGCCGGTC TTGCAGGCTT GTCCGGCTTC 
CACTGGCTGC GCGGAGAGCC TGCTCGGGCG ACCGGGACGA AGCCCGCGCG AAAGTTCGAG
ATCGAAAAGA CCGATGCCGA ATGGCGGGCT CAGTTGACGC CCGCACAATA TAATATCCTG
CGTAAGGAAG GCACCGAGCC GCCTTTCACC AGCCCACTGC TCAAGGAGCA TCGCAAGGGC
ACATTCGCCT GCGCAGGCTG CGACCTGCCG CTCTATTCGT CCGAAACGAA ATTCGAAAGC
GGCACCGGCT GGCCGAGCTT CTGGAAGCCG CTTCCCAACG CGGTCGGCGA AACCAGGGAT
ACGACCTTCG GCATGGCCCG CACCGAAATC CACTGCCGTC GCTGCGGCGG CCATCTCGGC
CATGTCTTCG ACGACGGCCC GAAGCCGACG GGCCTGCGCT ACTGCATGGA CGGACTGGCG
CTTGTCTTCC ATCCGTCGGC GCCGTCGGCG ACGTAG
 
Protein sequence
MIDRRILLAS AAGLAGLSGF HWLRGEPARA TGTKPARKFE IEKTDAEWRA QLTPAQYNIL 
RKEGTEPPFT SPLLKEHRKG TFACAGCDLP LYSSETKFES GTGWPSFWKP LPNAVGETRD
TTFGMARTEI HCRRCGGHLG HVFDDGPKPT GLRYCMDGLA LVFHPSAPSA T