Gene Nham_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1303 
Symbol 
ID4032144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1469921 
End bp1471333 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID637969780 
Productmannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 
Protein accessionYP_576588 
Protein GI92116859 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAGC GTATCATTCC GCTCGTCATG TGTGGCGGTG CTGGAACCCG GCTGTGGCCG 
GCCTCGCGCG AGGACCGCCC GAAGCAGTTT CTGCCGCTGT TCGGGCCGCG TTCGACGTTT
CAGGATACGC TGAGGCGGGT TTCCGATCCC GCGCTGTTCG AGCGGCCGAT CGTGGTCACC
AACGCCGCCT ACCGCTTCAT GGTGCTTGAA CAGCTCGCGG AGATCGGACT TGAAGCGGAC
ATTCTGCTGG AGCCGGCACG GCGCGACTCC GGACCGGCGA TCGCCGCGGG AGCCGCCTTC
GCGCAGATGC GTGACAACGC GGCCGTTGTT CTCGCGCTTG CGGCGGATCA CGTGGTGCGC
GACACGGATG CGTTCGTCTC CGCCTGCCGT CAGGGATTAG CTGCAGCGAA TGCCGGCCGC
ATCGTGACCT TCGGCGTCAG GCCGGAGCGG GCGGCAACCG AATACGGCTA TATCAGCCTG
GGTGCGGCGG TTGCGGGCGA GGTGCGCGCG GTGGCGACGT TCGTCGAGAA GCCCGATTCG
CAAACCGCCT CGGGCTACGT CGAGGCGGGG TATCTCTGGA ACAGCGGCAA CTTCATGTTC
CGTGCGGCGA TGCTGCTCGA TGAATACCGT AGCGTCGATC CCGAAAGCGT CCGGGCGGTG
ACCAATGCGG TGGCCCAGGC CGGCCGGGAT CTCGGCTTTG TCACGCTCGA CCCGGACGCC
TTTTCGAAGG CGCGGGCGAT TTCGATCGAT TACGCGGTGA TGGAAAAGAC CGCGCATGCC
GCCGTGGTTC CGGTCGATTG CGGCTGGTCG GACGTCGGAT CGTGGCACGC GGTATGGGAG
TTGTCGGACA AGGACGGTCA GGGCAATGCG GCGCAAGGGA CCGCAGTGTT CGAGGATTCC
CGCAACTGCA ATGTTTCGAC CGACAAGGCG CTGGTCGCGC TGGAAGGCGT CGACGATCTC
GTGGTGGTGG CGACGCAGGA TGCCGTGCTG GTTTCGCGCC AGAAGGACGC CAACGGGCTG
AAACGCCTGG TCACAAAGTT GAAGGCGCTG GCGCCGCAGG TCACGGAAGA GCATCTCCGG
GTCCATCGGC CCTGGGGCGC CTATCAGTCG ATCGACAGGG GCGAGCGGCA TCAGGTCAAG
CACATCACGG TGACGGCCGG CGAGCGGTTG TCGCTGCAAA AACACCATCA TCGCTCGGAG
CACTGGGTCG TGGTCCGGGG CACCGCGAAG GTAACGGTCG ATGACCTCGT CAAGACCGTG
CACGAGAACG AATCGATCTA TATTCCGATC GGAGCCACCC ATCGGCTGGA AAATCCCGGC
AAGATTCCAC TGGAACTGAT CGAAGTGCAG ACCGGCAGCT ATCTTGGCGA CGACGACATT
ATCCGCATCG AGGATGACTA TCGGCGAAGC TGA
 
Protein sequence
MSERIIPLVM CGGAGTRLWP ASREDRPKQF LPLFGPRSTF QDTLRRVSDP ALFERPIVVT 
NAAYRFMVLE QLAEIGLEAD ILLEPARRDS GPAIAAGAAF AQMRDNAAVV LALAADHVVR
DTDAFVSACR QGLAAANAGR IVTFGVRPER AATEYGYISL GAAVAGEVRA VATFVEKPDS
QTASGYVEAG YLWNSGNFMF RAAMLLDEYR SVDPESVRAV TNAVAQAGRD LGFVTLDPDA
FSKARAISID YAVMEKTAHA AVVPVDCGWS DVGSWHAVWE LSDKDGQGNA AQGTAVFEDS
RNCNVSTDKA LVALEGVDDL VVVATQDAVL VSRQKDANGL KRLVTKLKAL APQVTEEHLR
VHRPWGAYQS IDRGERHQVK HITVTAGERL SLQKHHHRSE HWVVVRGTAK VTVDDLVKTV
HENESIYIPI GATHRLENPG KIPLELIEVQ TGSYLGDDDI IRIEDDYRRS