Gene Nham_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1301 
Symbol 
ID4032142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1467565 
End bp1468617 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content62% 
IMG OID637969778 
Producthypothetical protein 
Protein accessionYP_576586 
Protein GI92116857 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCCA AAACCATACC AAGGCAACCG GGCCCACTGA TTGTCGTCCC GAAGATCCCG 
ACGGCCAACT TAACCTCGGC ACACACAAGC GCAATGCGCC AGATCCTGCT TTCAACGGCA
AAAATACTGG TCTCGGCTGC GCTGCTCTAC CTTGCGCTCC GCAAGGTCGA TGTCTCCGAC
CTCGTCTCGC GCCTCGGTTT CACCAGCGTT GGCTGGATCG CTCTCGCCGT GGCCGTGACG
TTGTTGCAGG TTCTTGTCAG CGCCCTGCGC TGGCGGGAAA TCAGCGCCGA CTGCGGTGCG
CCTCTCTCGG TCGCGCTGGC GGTGCGCTAT TGCATGATCG GCTCGTTCTT CAACCAGACC
CTGCCTTCGT CCATCGGCGG CGACGCCATG CGGCTCTGGC TGGTCGGACG CGGCCCGTCC
GGTTGGCGGG CAGCGGCCTA TTCGATCTTC GTCGACCGCG CGATCGGCCT GACTGCGCTC
GCCGTGCTGA TCGTCGCGAG TCTGCCATGG AGTTATCGGC TGATCGGCGA TCCTCAGGGC
CGGCTTGCGC TGCTGTTCGT CGATTTTGCC GCGCTGGCCG CCGCCGGAGG ATTCCTGCTT
CTCGGCAGAT TGCATTGGCC CTGGCTCAGC AATATCCGGG CCGTGAAGCA TCTTCGCACC
TGCTCGGTTA TCACCAACCA TGCCATCTTC AATCGCGAGC GCTGGTGGAA GATTGCGTCT
CTGTCGCTGC TCATCCATAT CCTCGCCGTC GTGGTCGCGT GGTGCGTCGT GAGGGCGATC
GCCGCGCCGA TCCTGTTCAG CGAGATCTTT CTGCTTGTTC CACCGGTCAT GCTGATTACG
ATGCTGCCTA TCTCGATAGC CGGCTGGGGC GTGCGCGAGG CCTCCATGGC CCTGGCTTTC
GGATACGCCG GACTAGCGAC CAGCGAAGGC ATCAATGTCG CGCTGTTGTA CGGCGCGGTG
TTTTTTGTCG TCGGCGCGCT CGGCGGGCTT GTCTGGATCT TCAGCGTCGA GAGGGCCGAG
AAGGGACCGG CTTCGATCGA ACTCACAAAA TAG
 
Protein sequence
MPSKTIPRQP GPLIVVPKIP TANLTSAHTS AMRQILLSTA KILVSAALLY LALRKVDVSD 
LVSRLGFTSV GWIALAVAVT LLQVLVSALR WREISADCGA PLSVALAVRY CMIGSFFNQT
LPSSIGGDAM RLWLVGRGPS GWRAAAYSIF VDRAIGLTAL AVLIVASLPW SYRLIGDPQG
RLALLFVDFA ALAAAGGFLL LGRLHWPWLS NIRAVKHLRT CSVITNHAIF NRERWWKIAS
LSLLIHILAV VVAWCVVRAI AAPILFSEIF LLVPPVMLIT MLPISIAGWG VREASMALAF
GYAGLATSEG INVALLYGAV FFVVGALGGL VWIFSVERAE KGPASIELTK